PDB Information

PDB5XYM
MethodELECTRON MICROSCOPY
Host Organism
Gene Source
Primary Citation
Cryo-EM structure of Mycobacterium smegmatis ribosome reveals two unidentified ribosomal proteins close to the functional centers.
Li, Z., Ge, X., Zhang, Y., Zheng, L., Sanyal, S., Gao, N.
Protein Cell
HeaderRibosome
Released2017-07-09
Resolution3.080
CATH Insert Date14 Nov, 2017

PDB Images (58)

PDB Prints

PDB Chains (31)

Chain ID Date inserted into CATH CATH Status
0 14 Nov, 2017 Chopped
1 14 Nov, 2017 Chopped
2 14 Nov, 2017 Chopped
3 14 Nov, 2017 Chopped
4 14 Nov, 2017 Rejected
a 14 Nov, 2017 Rejected
A 14 Nov, 2017 Rejected
B 14 Nov, 2017 Rejected
C 14 Nov, 2017 Chopped
D 14 Nov, 2017 Chopped
E 14 Nov, 2017 Chopped
F 14 Nov, 2017 Chopped
G 14 Nov, 2017 Holding pen
H 14 Nov, 2017 Rejected
J 14 Nov, 2017 Chopped
K 14 Nov, 2017 Chopped
L 14 Nov, 2017 Holding pen
M 14 Nov, 2017 Chopped
N 14 Nov, 2017 Chopped
O 14 Nov, 2017 Chopped
P 14 Nov, 2017 Chopped
Q 14 Nov, 2017 Chopped
R 14 Nov, 2017 Chopped
S 14 Nov, 2017 Chopped
T 14 Nov, 2017 Chopped
U 14 Nov, 2017 Chopped
V 14 Nov, 2017 Chopped
W 14 Nov, 2017 Holding pen
X 14 Nov, 2017 Chopped
Y 14 Nov, 2017 Chopped
Z 14 Nov, 2017 Chopped

CATH Domains (26)

Domain ID Date inserted into CATH Superfamily CATH Status
5xym000 16 Dec, 2017 Holding pen
5xym100 10 Dec, 2017 2.20.28.120 Assigned
5xym200 10 Dec, 2017 1.10.287.3980 Assigned
5xym300 10 Dec, 2017 Holding pen
5xymC01 10 Dec, 2017 2.40.50.140 Assigned
5xymC02 10 Dec, 2017 Holding pen
5xymC03 10 Dec, 2017 4.10.950.10 Assigned
5xymD00 10 Dec, 2017 Holding pen
5xymE00 10 Dec, 2017 Holding pen
5xymF00 21 Feb, 2018 Holding pen
5xymJ00 14 Dec, 2017 Holding pen
5xymK00 10 Dec, 2017 2.40.150.20 Assigned
5xymM01 10 Dec, 2017 3.90.1170.10 Assigned
5xymN00 10 Dec, 2017 3.90.1030.10 Assigned
5xymO01 10 Dec, 2017 3.30.420.100 Assigned
5xymP00 10 Dec, 2017 Holding pen
5xymQ00 10 Dec, 2017 Holding pen
5xymR00 10 Dec, 2017 Holding pen
5xymS00 10 Dec, 2017 3.90.470.10 Assigned
5xymT00 10 Dec, 2017 3.30.70.330 Assigned
5xymU00 10 Dec, 2017 Holding pen
5xymV01 16 Dec, 2017 Holding pen
5xymV02 16 Dec, 2017 Holding pen
5xymX00 16 Dec, 2017 Holding pen
5xymY00 10 Dec, 2017 Holding pen
5xymZ00 10 Dec, 2017 3.30.1390.20 Assigned

UniProtKB Entries (25)

Accession Gene ID Taxon Description
A0QSL9 RL17_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L17
A0R7K0 RL34_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L34
A0R150 RL27_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L27
A0R551 RL332_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L33 2
A0QSG0 RL24_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L24
A0QSD1 RL3_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L3
A0QSG4 RL6_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L6
A0QSG8 A0QSG8_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L15
A0QSD3 RL23_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L23
A0QSG5 A0QSG5_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L18
A0QV42 RL19_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L19
A0QSF9 RL14_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L14
A0QYU6 RL20_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L20
A0QSD9 RL29_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L29
A0QSD8 RL16_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L16
A0R3D2 A0R3D2_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L25
A0QSD6 RL22_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L22
A0QSD4 RL2_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L2
A0QSG1 RL5_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L5
A0QSD2 RL4_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L4
A0QSG7 RL30_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L30
A0QYU7 RL35_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L35
A0R7F6 RL9_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L9
A0QV03 A0QV03_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L28
A0QSP8 RL13_MYCS2 Mycolicibacterium smegmatis MC2 155 50S ribosomal protein L13