PDB 5vyp

PDB Information

PDB5VYP
MethodX-RAY DIFFRACTION
Host OrganismKomagataella pastoris
Gene SourceNicotiana suaveolens
Primary Citation
Structure of the defensin NsD7 in complex with PIP2 reveals that defensin : lipid oligomer topologies are dependent on lipid type.
Jarva, M., Lay, F.T., Hulett, M.D., Kvansakul, M.
FEBS Lett.
HeaderAntimicrobial Protein
Released2017-05-25
Resolution2.600
CATH Insert Date14 Nov, 2017

PDB Images (49)

PDB Prints

PDB Chains (24)

Chain ID Date inserted into CATH CATH Status
A 14 Nov, 2017 Chopped
B 14 Nov, 2017 Chopped
C 14 Nov, 2017 Chopped
D 14 Nov, 2017 Chopped
E 14 Nov, 2017 Chopped
F 14 Nov, 2017 Chopped
G 14 Nov, 2017 Chopped
H 14 Nov, 2017 Chopped
I 14 Nov, 2017 Chopped
J 14 Nov, 2017 Chopped
K 14 Nov, 2017 Chopped
L 14 Nov, 2017 Chopped
M 14 Nov, 2017 Chopped
N 14 Nov, 2017 Chopped
O 14 Nov, 2017 Chopped
P 14 Nov, 2017 Chopped
Q 14 Nov, 2017 Chopped
R 14 Nov, 2017 Chopped
S 14 Nov, 2017 Chopped
T 14 Nov, 2017 Chopped
U 14 Nov, 2017 Chopped
V 14 Nov, 2017 Chopped
W 14 Nov, 2017 Chopped
X 14 Nov, 2017 Chopped

CATH Domains (24)

Domain ID Date inserted into CATH Superfamily CATH Status
5vypA00 10 Dec, 2017 3.30.30.10 Assigned
5vypB00 10 Dec, 2017 3.30.30.10 Assigned
5vypC00 10 Dec, 2017 3.30.30.10 Assigned
5vypD00 10 Dec, 2017 3.30.30.10 Assigned
5vypE00 10 Dec, 2017 3.30.30.10 Assigned
5vypF00 10 Dec, 2017 3.30.30.10 Assigned
5vypG00 10 Dec, 2017 3.30.30.10 Assigned
5vypH00 10 Dec, 2017 3.30.30.10 Assigned
5vypI00 10 Dec, 2017 3.30.30.10 Assigned
5vypJ00 10 Dec, 2017 3.30.30.10 Assigned
5vypK00 10 Dec, 2017 3.30.30.10 Assigned
5vypL00 10 Dec, 2017 3.30.30.10 Assigned
5vypM00 10 Dec, 2017 3.30.30.10 Assigned
5vypN00 10 Dec, 2017 3.30.30.10 Assigned
5vypO00 10 Dec, 2017 3.30.30.10 Assigned
5vypP00 10 Dec, 2017 3.30.30.10 Assigned
5vypQ00 10 Dec, 2017 3.30.30.10 Assigned
5vypR00 10 Dec, 2017 3.30.30.10 Assigned
5vypS00 10 Dec, 2017 3.30.30.10 Assigned
5vypT00 10 Dec, 2017 3.30.30.10 Assigned
5vypU00 10 Dec, 2017 3.30.30.10 Assigned
5vypV00 10 Dec, 2017 3.30.30.10 Assigned
5vypW00 10 Dec, 2017 3.30.30.10 Assigned
5vypX00 10 Dec, 2017 3.30.30.10 Assigned

UniProtKB Entries (24)

Accession Gene ID Taxon Description
C0HK49 DEF_NICSU Nicotiana suaveolens Defensin NsD7
C0HK49 DEF_NICSU Nicotiana suaveolens Defensin NsD7
C0HK49 DEF_NICSU Nicotiana suaveolens Defensin NsD7
C0HK49 DEF_NICSU Nicotiana suaveolens Defensin NsD7
C0HK49 DEF_NICSU Nicotiana suaveolens Defensin NsD7
C0HK49 DEF_NICSU Nicotiana suaveolens Defensin NsD7
C0HK49 DEF_NICSU Nicotiana suaveolens Defensin NsD7
C0HK49 DEF_NICSU Nicotiana suaveolens Defensin NsD7
C0HK49 DEF_NICSU Nicotiana suaveolens Defensin NsD7
C0HK49 DEF_NICSU Nicotiana suaveolens Defensin NsD7
C0HK49 DEF_NICSU Nicotiana suaveolens Defensin NsD7
C0HK49 DEF_NICSU Nicotiana suaveolens Defensin NsD7
C0HK49 DEF_NICSU Nicotiana suaveolens Defensin NsD7
C0HK49 DEF_NICSU Nicotiana suaveolens Defensin NsD7
C0HK49 DEF_NICSU Nicotiana suaveolens Defensin NsD7
C0HK49 DEF_NICSU Nicotiana suaveolens Defensin NsD7
C0HK49 DEF_NICSU Nicotiana suaveolens Defensin NsD7
C0HK49 DEF_NICSU Nicotiana suaveolens Defensin NsD7
C0HK49 DEF_NICSU Nicotiana suaveolens Defensin NsD7
C0HK49 DEF_NICSU Nicotiana suaveolens Defensin NsD7
C0HK49 DEF_NICSU Nicotiana suaveolens Defensin NsD7
C0HK49 DEF_NICSU Nicotiana suaveolens Defensin NsD7
C0HK49 DEF_NICSU Nicotiana suaveolens Defensin NsD7
C0HK49 DEF_NICSU Nicotiana suaveolens Defensin NsD7