PDB 5jvg

PDB Information

PDB5JVG
MethodX-RAY DIFFRACTION
Host Organism
Gene Source
Primary Citation
Avilamycin and evernimicin induce structural changes in rProteins uL16 and CTC that enhance the inhibition of A-site tRNA binding.
Krupkin, M., Wekselman, I., Matzov, D., Eyal, Z., Diskin Posner, Y., Rozenberg, H., Zimmerman, E., Bashan, A., Yonath, A.
Proc.Natl.Acad.Sci.USA
HeaderRibosome
Released2016-05-11
Resolution3.430
CATH Insert Date20 Nov, 2016

PDB Images (57)

PDB Prints

PDB Chains (29)

Chain ID Date inserted into CATH CATH Status
1 21 Nov, 2016 Chopped
2 21 Nov, 2016 Chopped
3 21 Nov, 2016 Chopped
A 21 Nov, 2016 Holding pen
B 21 Nov, 2016 Chopped
C 21 Nov, 2016 Chopped
D 21 Nov, 2016 Chopped
E 21 Nov, 2016 Chopped
F 21 Nov, 2016 Chopped
G 21 Nov, 2016 Chopped
H 21 Nov, 2016 Chopped
I 21 Nov, 2016 Chopped
J 21 Nov, 2016 Chopped
K 21 Nov, 2016 Chopped
L 21 Nov, 2016 Chopped
M 21 Nov, 2016 Chopped
N 21 Nov, 2016 Holding pen
O 21 Nov, 2016 Chopped
P 21 Nov, 2016 Chopped
Q 21 Nov, 2016 Chopped
R 21 Nov, 2016 Chopped
S 21 Nov, 2016 Chopped
T 21 Nov, 2016 Chopped
U 21 Nov, 2016 Chopped
V 21 Nov, 2016 Chopped
W 21 Nov, 2016 Chopped
X 21 Nov, 2016 Rejected
Y 21 Nov, 2016 Rejected
Z 21 Nov, 2016 Chopped

CATH Domains (27)

Domain ID Date inserted into CATH Superfamily CATH Status
5jvg100 24 Nov, 2016 2.20.28.120 Assigned
5jvg200 24 Nov, 2016 1.10.287.3980 Assigned
5jvg300 24 Nov, 2016 4.10.410.60 Assigned
5jvgB00 24 Nov, 2016 Holding pen
5jvgC00 24 Nov, 2016 Holding pen
5jvgD00 24 Nov, 2016 3.30.1440.10 Assigned
5jvgE01 24 Nov, 2016 3.90.930.12 Assigned
5jvgE02 24 Nov, 2016 3.90.930.12 Assigned
5jvgF00 24 Nov, 2016 1.10.10.250 Assigned
5jvgG00 14 Dec, 2017 Holding pen
5jvgH00 24 Nov, 2016 2.40.150.20 Assigned
5jvgI00 24 Nov, 2016 Holding pen
5jvgJ01 24 Nov, 2016 3.90.1170.10 Assigned
5jvgK00 24 Nov, 2016 3.90.1030.10 Assigned
5jvgL01 24 Nov, 2016 3.30.420.100 Assigned
5jvgM00 24 Nov, 2016 Holding pen
5jvgO00 24 Nov, 2016 Holding pen
5jvgP00 24 Nov, 2016 3.90.470.10 Assigned
5jvgQ00 24 Nov, 2016 3.30.70.330 Assigned
5jvgR00 24 Nov, 2016 Holding pen
5jvgS01 24 Nov, 2016 2.40.240.10 Assigned
5jvgS02 24 Nov, 2016 2.170.120.20 Assigned
5jvgT01 24 Nov, 2016 Holding pen
5jvgU00 24 Nov, 2016 Holding pen
5jvgV00 24 Nov, 2016 Holding pen
5jvgW00 24 Nov, 2016 3.30.1390.20 Assigned
5jvgZ01 24 Nov, 2016 Holding pen

UniProtKB Entries (26)

Accession Gene ID Taxon Description
Q9RXY1 RL13_DEIRA Deinococcus radiodurans R1 50S ribosomal protein L13
Q9RSW6 RL35_DEIRA Deinococcus radiodurans R1 50S ribosomal protein L35
Q9RRG8 RL28_DEIRA Deinococcus radiodurans R1 50S ribosomal protein L28
Q9RXJ7 RL22_DEIRA Deinococcus radiodurans R1 50S ribosomal protein L22
Q9RSL3 RL6_DEIRA Deinococcus radiodurans R1 50S ribosomal protein L6
Q9RSW7 RL20_DEIRA Deinococcus radiodurans R1 50S ribosomal protein L20
Q9RXJ5 RL16_DEIRA Deinococcus radiodurans R1 50S ribosomal protein L16
Q9RSJ5 RL17_DEIRA Deinococcus radiodurans R1 50S ribosomal protein L17
Q9RXK1 RL4_DEIRA Deinococcus radiodurans R1 50S ribosomal protein L4
Q9RXJ1 RL24_DEIRA Deinococcus radiodurans R1 50S ribosomal protein L24
Q9RX88 RL25_DEIRA Deinococcus radiodurans R1 50S ribosomal protein L25
Q9RXJ0 RL5_DEIRA Deinococcus radiodurans R1 50S ribosomal protein L5
Q9RY65 RL27_DEIRA Deinococcus radiodurans R1 50S ribosomal protein L27
Q9RSK9 RL15_DEIRA Deinococcus radiodurans R1 50S ribosomal protein L15
Q9RXK0 RL23_DEIRA Deinococcus radiodurans R1 50S ribosomal protein L23
Q9RSS4 RL33_DEIRA Deinococcus radiodurans R1 50S ribosomal protein L33
Q9RSL2 RL18_DEIRA Deinococcus radiodurans R1 50S ribosomal protein L18
Q9RXJ2 RL14_DEIRA Deinococcus radiodurans R1 50S ribosomal protein L14
Q9RSH2 RL34_DEIRA Deinococcus radiodurans R1 50S ribosomal protein L34
Q9RXK2 RL3_DEIRA Deinococcus radiodurans R1 50S ribosomal protein L3
Q9RXJ9 RL2_DEIRA Deinococcus radiodurans R1 50S ribosomal protein L2
Q9RXJ4 RL29_DEIRA Deinococcus radiodurans R1 50S ribosomal protein L29
Q9RWB4 RL19_DEIRA Deinococcus radiodurans R1 50S ribosomal protein L19
Q9RSL0 RL30_DEIRA Deinococcus radiodurans R1 50S ribosomal protein L30
Q9RSS7 RL11_DEIRA Deinococcus radiodurans R1 50S ribosomal protein L11
P49228 RL32_DEIRA Deinococcus radiodurans R1 50S ribosomal protein L32