PDB Information

PDB5GAD
MethodELECTRON MICROSCOPY
Host Organism
Gene Source
Primary Citation
Structures of the E. coli translating ribosome with SRP and its receptor and with the translocon.
Jomaa, A., Boehringer, D., Leibundgut, M., Ban, N.
Nat Commun
HeaderRibosome
Released2015-11-24
Resolution3.700
CATH Insert Date10 Apr, 2016

PDB Images (69)

PDB Prints

PDB Chains (37)

Chain ID Date inserted into CATH CATH Status
1 11 Apr, 2016 Rejected
2 11 Apr, 2016 Rejected
a 11 Apr, 2016 Chopped
A 11 Apr, 2016 Rejected
b 11 Apr, 2016 Chopped
B 11 Apr, 2016 Rejected
c 11 Apr, 2016 Chopped
C 11 Apr, 2016 Chopped
d 11 Apr, 2016 Chopped
D 11 Apr, 2016 Chopped
e 11 Apr, 2016 Chopped
E 11 Apr, 2016 Chopped
f 11 Apr, 2016 Rejected
F 11 Apr, 2016 Chopped
G 11 Apr, 2016 Chopped
H 11 Apr, 2016 Domchop allotted
i 11 Apr, 2016 Domchop allotted
I 11 Apr, 2016 Chopped
J 11 Apr, 2016 Chopped
k 11 Apr, 2016 Rejected
K 11 Apr, 2016 Holding pen
l 11 Apr, 2016 Chopped
L 11 Apr, 2016 Chopped
M 11 Apr, 2016 Chopped
N 11 Apr, 2016 Chopped
O 11 Apr, 2016 Chopped
P 11 Apr, 2016 Chopped
Q 11 Apr, 2016 Chopped
R 11 Apr, 2016 Holding pen
S 11 Apr, 2016 Chopped
T 11 Apr, 2016 Chopped
U 11 Apr, 2016 Chopped
V 11 Apr, 2016 Chopped
W 11 Apr, 2016 Chopped
X 11 Apr, 2016 Chopped
Y 11 Apr, 2016 Chopped
Z 11 Apr, 2016 Chopped

CATH Domains (31)

Domain ID Date inserted into CATH Superfamily CATH Status
5gada00 12 May, 2016 3.30.1390.20 Assigned
5gadb00 12 May, 2016 Holding pen
5gadc00 12 May, 2016 2.20.28.120 Assigned
5gadC01 11 May, 2017 2.40.50.140 Assigned
5gadC02 11 May, 2017 Holding pen
5gadC03 11 May, 2017 4.10.950.10 Assigned
5gadd00 12 May, 2016 New
5gadD00 12 May, 2016 Holding pen
5gade00 12 May, 2016 Holding pen
5gadE00 12 May, 2016 Holding pen
5gadF00 12 May, 2016 3.30.1440.10 Assigned
5gadG01 12 May, 2016 3.90.930.12 Assigned
5gadG02 12 May, 2016 3.90.930.12 Assigned
5gadI00 12 May, 2016 3.30.70.1730 Assigned
5gadJ01 12 May, 2016 3.30.1550.10 Assigned
5gadJ02 12 May, 2016 1.10.10.250 Assigned
5gadl00 29 Nov, 2016 3.40.50.300 Assigned
5gadL00 12 May, 2016 2.40.150.20 Assigned
5gadM00 12 May, 2016 Holding pen
5gadN01 12 May, 2016 3.90.1170.10 Assigned
5gadO01 12 May, 2016 3.90.1030.10 Assigned
5gadP00 12 May, 2016 3.30.420.100 Assigned
5gadQ00 12 May, 2016 Holding pen
5gadS00 12 May, 2016 Holding pen
5gadT00 12 May, 2016 3.90.470.10 Assigned
5gadU00 12 May, 2016 3.30.70.330 Assigned
5gadV00 12 May, 2016 Holding pen
5gadW00 12 May, 2016 2.40.240.10 Assigned
5gadX01 12 May, 2016 Holding pen
5gadY00 12 May, 2016 Holding pen
5gadZ00 12 May, 2016 Holding pen

UniProtKB Entries (29)

Accession Gene ID Taxon Description
P0A7M6 RL29_ECOLI Escherichia coli K-12 50S ribosomal protein L29
P10121 FTSY_ECOLI Escherichia coli K-12 Signal recognition particle receptor FtsY
P0AG44 RL17_ECOLI Escherichia coli K-12 50S ribosomal protein L17
P0ADY3 RL14_ECOLI Escherichia coli K-12 50S ribosomal protein L14
P0A7K6 RL19_ECOLI Escherichia coli K-12 50S ribosomal protein L19
P0AG51 RL30_ECOLI Escherichia coli K-12 50S ribosomal protein L30
P0A7L3 RL20_ECOLI Escherichia coli K-12 50S ribosomal protein L20
P60438 RL3_ECOLI Escherichia coli K-12 50S ribosomal protein L3
P61175 RL22_ECOLI Escherichia coli K-12 50S ribosomal protein L22
P60723 RL4_ECOLI Escherichia coli K-12 50S ribosomal protein L4
P0A7Q1 RL35_ECOLI Escherichia coli K-12 50S ribosomal protein L35
P0AA10 RL13_ECOLI Escherichia coli K-12 50S ribosomal protein L13
P68919 RL25_ECOLI Escherichia coli K-12 50S ribosomal protein L25
P0A7M2 RL28_ECOLI Escherichia coli K-12 50S ribosomal protein L28
P0ADZ0 RL23_ECOLI Escherichia coli K-12 50S ribosomal protein L23
P0A7J7 RL11_ECOLI Escherichia coli K-12 50S ribosomal protein L11
P0AG55 RL6_ECOLI Escherichia coli K-12 50S ribosomal protein L6
P0A7N9 RL33_ECOLI Escherichia coli K-12 50S ribosomal protein L33
P0A7L8 RL27_ECOLI Escherichia coli K-12 50S ribosomal protein L27
P0A7R1 RL9_ECOLI Escherichia coli K-12 50S ribosomal protein L9
P0A7J3 RL10_ECOLI Escherichia coli K-12 50S ribosomal protein L10
P0AGD7 SRP54_ECOLI Escherichia coli K-12 Signal recognition particle protein
P0ADY7 RL16_ECOLI Escherichia coli K-12 50S ribosomal protein L16
P00634 PPB_ECOLI Escherichia coli K-12 Alkaline phosphatase
P02413 RL15_ECOLI Escherichia coli K-12 50S ribosomal protein L15
P60624 RL24_ECOLI Escherichia coli K-12 50S ribosomal protein L24
P0C018 RL18_ECOLI Escherichia coli K-12 50S ribosomal protein L18
P60422 RL2_ECOLI Escherichia coli K-12 50S ribosomal protein L2
P62399 RL5_ECOLI Escherichia coli K-12 50S ribosomal protein L5