PDB 5gad

PDB Links
Overview

PDB Information

PDB	5GAD
Method	ELECTRON MICROSCOPY
Host Organism
Gene Source
Primary Citation	Structures of the E. coli translating ribosome with SRP and its receptor and with the translocon. Jomaa, A., Boehringer, D., Leibundgut, M., Ban, N. Nat Commun
Header	Ribosome
Released	2015-11-24
Resolution	3.700
CATH Insert Date	10 Apr, 2016

PDB Images (73)

5gad

PDB 5gad

5gad1

PDB Chain 5gad1

5gad2

PDB Chain 5gad2

5gada

PDB Chain 5gada

5gadA

PDB Chain 5gadA

5gadb

PDB Chain 5gadb

5gadB

PDB Chain 5gadB

5gadc

PDB Chain 5gadc

5gadC

PDB Chain 5gadC

5gadd

PDB Chain 5gadd

5gadD

PDB Chain 5gadD

5gade

PDB Chain 5gade

5gadE

PDB Chain 5gadE

5gadf

PDB Chain 5gadf

5gadF

PDB Chain 5gadF

5gadG

PDB Chain 5gadG

5gadH

PDB Chain 5gadH

5gadi

PDB Chain 5gadi

5gadI

PDB Chain 5gadI

5gadJ

PDB Chain 5gadJ

5gadk

PDB Chain 5gadk

5gadK

PDB Chain 5gadK

5gadl

PDB Chain 5gadl

5gadL

PDB Chain 5gadL

5gadM

PDB Chain 5gadM

5gadN

PDB Chain 5gadN

5gadO

PDB Chain 5gadO

5gadP

PDB Chain 5gadP

5gadQ

PDB Chain 5gadQ

5gadR

PDB Chain 5gadR

5gadS

PDB Chain 5gadS

5gadT

PDB Chain 5gadT

5gadU

PDB Chain 5gadU

5gadV

PDB Chain 5gadV

5gadW

PDB Chain 5gadW

5gadX

PDB Chain 5gadX

5gadY

PDB Chain 5gadY

5gadZ

PDB Chain 5gadZ

5gada00

CATH Domain 5gada00

5gadb00

CATH Domain 5gadb00

5gadc00

CATH Domain 5gadc00

5gadC01

CATH Domain 5gadC01

5gadC02

CATH Domain 5gadC02

5gadC03

CATH Domain 5gadC03

5gadd00

CATH Domain 5gadd00

5gadD00

CATH Domain 5gadD00

5gade00

CATH Domain 5gade00

5gadE00

CATH Domain 5gadE00

5gadF00

CATH Domain 5gadF00

5gadG01

CATH Domain 5gadG01

5gadG02

CATH Domain 5gadG02

5gadI00

CATH Domain 5gadI00

5gadi01

CATH Domain 5gadi01

5gadi02

CATH Domain 5gadi02

5gadi03

CATH Domain 5gadi03

5gadJ01

CATH Domain 5gadJ01

5gadJ02

CATH Domain 5gadJ02

5gadK00

CATH Domain 5gadK00

5gadl00

CATH Domain 5gadl00

5gadL00

CATH Domain 5gadL00

5gadM00

CATH Domain 5gadM00

5gadN01

CATH Domain 5gadN01

5gadO01

CATH Domain 5gadO01

5gadP00

CATH Domain 5gadP00

5gadQ00

CATH Domain 5gadQ00

5gadS00

CATH Domain 5gadS00

5gadT00

CATH Domain 5gadT00

5gadU00

CATH Domain 5gadU00

5gadV00

CATH Domain 5gadV00

5gadW00

CATH Domain 5gadW00

5gadX01

CATH Domain 5gadX01

5gadY00

CATH Domain 5gadY00

5gadZ00

CATH Domain 5gadZ00

PDB Prints

PDB Chains (37)

Chain ID	Date inserted into CATH	CATH Status
1	11 Apr, 2016	Rejected
2	11 Apr, 2016	Rejected
a	11 Apr, 2016	Chopped
A	11 Apr, 2016	Rejected
b	11 Apr, 2016	Chopped
B	11 Apr, 2016	Rejected
c	11 Apr, 2016	Chopped
C	11 Apr, 2016	Chopped
d	11 Apr, 2016	Chopped
D	11 Apr, 2016	Chopped
e	11 Apr, 2016	Chopped
E	11 Apr, 2016	Chopped
f	11 Apr, 2016	Rejected
F	11 Apr, 2016	Chopped
G	11 Apr, 2016	Chopped
H	11 Apr, 2016	Domchop review
i	11 Apr, 2016	Chopped
I	11 Apr, 2016	Chopped
J	11 Apr, 2016	Chopped
k	11 Apr, 2016	Rejected
K	11 Apr, 2016	Chopped
l	11 Apr, 2016	Chopped
L	11 Apr, 2016	Chopped
M	11 Apr, 2016	Chopped
N	11 Apr, 2016	Chopped
O	11 Apr, 2016	Chopped
P	11 Apr, 2016	Chopped
Q	11 Apr, 2016	Chopped
R	11 Apr, 2016	Holding pen
S	11 Apr, 2016	Chopped
T	11 Apr, 2016	Chopped
U	11 Apr, 2016	Chopped
V	11 Apr, 2016	Chopped
W	11 Apr, 2016	Chopped
X	11 Apr, 2016	Chopped
Y	11 Apr, 2016	Chopped
Z	11 Apr, 2016	Chopped

CATH Domains (35)

Domain ID	Date inserted into CATH	Superfamily	CATH Status
5gada00	12 May, 2016	3.30.1390.20	Assigned
5gadb00	12 May, 2016		Holding pen
5gadc00	12 May, 2016	2.20.28.120	Assigned
5gadC01	11 May, 2017	2.40.50.140	Assigned
5gadC02	11 May, 2017		Holding pen
5gadC03	11 May, 2017	4.10.950.10	Assigned
5gadd00	12 May, 2016	1.10.287.3980	Assigned
5gadD00	12 May, 2016		Holding pen
5gade00	12 May, 2016		Holding pen
5gadE00	12 May, 2016		Holding pen
5gadF00	12 May, 2016	3.30.1440.10	Assigned
5gadG01	12 May, 2016	3.90.930.12	Assigned
5gadG02	12 May, 2016	3.90.930.12	Assigned
5gadI00	12 May, 2016	3.30.70.1730	Assigned
5gadi01	28 Mar, 2018		Holding pen
5gadi02	28 Mar, 2018	3.40.50.300	Assigned
5gadi03	28 Mar, 2018	1.10.260.30	Assigned
5gadJ01	12 May, 2016	3.30.1550.10	Assigned
5gadJ02	12 May, 2016	1.10.10.250	Assigned
5gadK00	07 Dec, 2017		Holding pen
5gadl00	29 Nov, 2016	3.40.50.300	Assigned
5gadL00	12 May, 2016	2.40.150.20	Assigned
5gadM00	12 May, 2016		Holding pen
5gadN01	12 May, 2016	3.90.1170.10	Assigned
5gadO01	12 May, 2016	3.90.1030.10	Assigned
5gadP00	12 May, 2016	3.30.420.100	Assigned
5gadQ00	12 May, 2016		Holding pen
5gadS00	12 May, 2016		Holding pen
5gadT00	12 May, 2016	3.90.470.10	Assigned
5gadU00	12 May, 2016	3.30.70.330	Assigned
5gadV00	12 May, 2016		Holding pen
5gadW00	12 May, 2016	2.40.240.10	Assigned
5gadX01	12 May, 2016		Holding pen
5gadY00	12 May, 2016		Holding pen
5gadZ00	12 May, 2016		Holding pen

UniProtKB Entries (30)

Accession	Gene ID	Taxon	Description
P0ADZ0	RL23_ECOLI	Escherichia coli K-12	50S ribosomal protein L23
P0A7J7	RL11_ECOLI	Escherichia coli K-12	50S ribosomal protein L11
P0A7M6	RL29_ECOLI	Escherichia coli K-12	50S ribosomal protein L29
P0A7P5	RL34_ECOLI	Escherichia coli K-12	50S ribosomal protein L34
P0A7L8	RL27_ECOLI	Escherichia coli K-12	50S ribosomal protein L27
P0ADY3	RL14_ECOLI	Escherichia coli K-12	50S ribosomal protein L14
P0A7K6	RL19_ECOLI	Escherichia coli K-12	50S ribosomal protein L19
P0AG51	RL30_ECOLI	Escherichia coli K-12	50S ribosomal protein L30
P0A7L3	RL20_ECOLI	Escherichia coli K-12	50S ribosomal protein L20
P0A7N9	RL33_ECOLI	Escherichia coli K-12	50S ribosomal protein L33
P60438	RL3_ECOLI	Escherichia coli K-12	50S ribosomal protein L3
P61175	RL22_ECOLI	Escherichia coli K-12	50S ribosomal protein L22
P60624	RL24_ECOLI	Escherichia coli K-12	50S ribosomal protein L24
P60723	RL4_ECOLI	Escherichia coli K-12	50S ribosomal protein L4
P0A7Q1	RL35_ECOLI	Escherichia coli K-12	50S ribosomal protein L35
P0AA10	RL13_ECOLI	Escherichia coli K-12	50S ribosomal protein L13
P68919	RL25_ECOLI	Escherichia coli K-12	50S ribosomal protein L25
P0A7M2	RL28_ECOLI	Escherichia coli K-12	50S ribosomal protein L28
P10121	FTSY_ECOLI	Escherichia coli K-12	Signal recognition particle receptor FtsY
P0AG55	RL6_ECOLI	Escherichia coli K-12	50S ribosomal protein L6
P0A7R1	RL9_ECOLI	Escherichia coli K-12	50S ribosomal protein L9
P60422	RL2_ECOLI	Escherichia coli K-12	50S ribosomal protein L2
P0AGD7	SRP54_ECOLI	Escherichia coli K-12	Signal recognition particle protein
P0ADY7	RL16_ECOLI	Escherichia coli K-12	50S ribosomal protein L16
P62399	RL5_ECOLI	Escherichia coli K-12	50S ribosomal protein L5
P00634	PPB_ECOLI	Escherichia coli K-12	Alkaline phosphatase
P02413	RL15_ECOLI	Escherichia coli K-12	50S ribosomal protein L15
P0AG44	RL17_ECOLI	Escherichia coli K-12	50S ribosomal protein L17
P0A7J3	RL10_ECOLI	Escherichia coli K-12	50S ribosomal protein L10
P0C018	RL18_ECOLI	Escherichia coli K-12	50S ribosomal protein L18