PDB Information

PDB4GKK
MethodX-RAY DIFFRACTION
Host Organism
Gene Source
Primary Citation
Expanded use of sense codons is regulated by modified cytidines in tRNA.
Cantara, W.A., Murphy, F.V., Demirci, H., Agris, P.F.
Proc.Natl.Acad.Sci.USA
HeaderRibosome/Antibiotic
Released2012-08-11
Resolution3.2
CATH Insert Date07 Jul, 2013

PDB Images (49)

PDB Prints

PDB Chains (23)

Chain ID Date inserted into CATH CATH Status
A 08 Jul, 2013 Rejected
B 08 Jul, 2013 Chopped
C 08 Jul, 2013 Chopped
D 08 Jul, 2013 Chopped
E 08 Jul, 2013 Chopped
F 08 Jul, 2013 Chopped
G 08 Jul, 2013 Chopped
H 08 Jul, 2013 Chopped
I 08 Jul, 2013 Chopped
J 08 Jul, 2013 Chopped
K 08 Jul, 2013 Chopped
L 08 Jul, 2013 Chopped
M 08 Jul, 2013 Chopped
N 08 Jul, 2013 Chopped
O 08 Jul, 2013 Chopped
P 08 Jul, 2013 Chopped
Q 08 Jul, 2013 Chopped
R 08 Jul, 2013 Chopped
S 08 Jul, 2013 Chopped
T 08 Jul, 2013 Chopped
V 08 Jul, 2013 Rejected
W 08 Jul, 2013 Rejected
X 08 Jul, 2013 Rejected

CATH Domains (25)

Domain ID Date inserted into CATH Superfamily CATH Status
4gkkB01 09 Aug, 2013 Holding pen
4gkkB02 09 Aug, 2013 1.10.287.610 Assigned
4gkkC01 09 Aug, 2013 3.30.300.20 Assigned
4gkkC02 09 Aug, 2013 3.30.1140.32 Assigned
4gkkD01 09 Aug, 2013 1.10.1050.10 Assigned
4gkkD02 09 Aug, 2013 3.10.290.10 Assigned
4gkkE01 09 Aug, 2013 3.30.160.20 Assigned
4gkkE02 09 Aug, 2013 3.30.230.10 Assigned
4gkkF00 09 Aug, 2013 3.30.70.60 Assigned
4gkkG00 09 Aug, 2013 1.10.455.10 Assigned
4gkkH01 09 Aug, 2013 Holding pen
4gkkH02 09 Aug, 2013 3.30.1490.10 Assigned
4gkkI00 09 Aug, 2013 3.30.230.10 Assigned
4gkkJ00 09 Aug, 2013 Holding pen
4gkkK00 09 Aug, 2013 3.30.420.80 Assigned
4gkkL00 09 Aug, 2013 2.40.50.140 Assigned
4gkkM01 09 Aug, 2013 1.10.8.50 Assigned
4gkkM02 09 Aug, 2013 4.10.910.10 Assigned
4gkkN00 09 Aug, 2013 4.10.830.10 Assigned
4gkkO00 09 Aug, 2013 1.10.287.10 Assigned
4gkkP00 09 Aug, 2013 Holding pen
4gkkQ00 09 Aug, 2013 2.40.50.140 Assigned
4gkkR00 09 Aug, 2013 4.10.640.10 Assigned
4gkkS00 09 Aug, 2013 3.30.860.10 Assigned
4gkkT00 09 Aug, 2013 1.20.58.110 Assigned

UniProtKB Entries (19)

Accession Gene ID Taxon Description
Q5SHP7 RS17_THET8 Thermus thermophilus HB8 30S ribosomal protein S17
Q5SHN7 RS10_THET8 Thermus thermophilus HB8 30S ribosomal protein S10
P17291 RS7_THET8 Thermus thermophilus HB8 30S ribosomal protein S7
P80376 RS11_THET8 Thermus thermophilus HB8 30S ribosomal protein S11
Q5SJ76 RS15_THET8 Thermus thermophilus HB8 30S ribosomal protein S15
Q5SHQ1 RS14Z_THET8 Thermus thermophilus HB8 30S ribosomal protein S14 type Z
Q5SHN3 RS12_THET8 Thermus thermophilus HB8 30S ribosomal protein S12
P80380 RS20_THET8 Thermus thermophilus HB8 30S ribosomal protein S20
Q5SJH3 RS16_THET8 Thermus thermophilus HB8 30S ribosomal protein S16
P80371 RS2_THET8 Thermus thermophilus HB8 30S ribosomal protein S2
P80373 RS4_THET8 Thermus thermophilus HB8 30S ribosomal protein S4
Q5SLQ0 RS18_THET8 Thermus thermophilus HB8 30S ribosomal protein S18
Q5SHQ5 RS5_THET8 Thermus thermophilus HB8 30S ribosomal protein S5
P80372 RS3_THET8 Thermus thermophilus HB8 30S ribosomal protein S3
Q5SHQ2 RS8_THET8 Thermus thermophilus HB8 30S ribosomal protein S8
Q5SLP8 RS6_THET8 Thermus thermophilus HB8 30S ribosomal protein S6
Q5SHP2 RS19_THET8 Thermus thermophilus HB8 30S ribosomal protein S19
P80377 RS13_THET8 Thermus thermophilus HB8 30S ribosomal protein S13
P80374 RS9_THET8 Thermus thermophilus HB8 30S ribosomal protein S9