PDB Information

PDB3PYR
MethodX-RAY DIFFRACTION
Host Organism
Gene Source
Primary Citation
Crystal structures of complexes containing domains from two viral internal ribosome entry site (IRES) RNAs bound to the 70S ribosome.
Zhu, J., Korostelev, A., Costantino, D.A., Donohue, J.P., Noller, H.F., Kieft, J.S.
Proc.Natl.Acad.Sci.USA
HeaderRibosome
Released2010-12-13
Resolution3.5
CATH Insert Date13 Feb, 2011

PDB Images (56)

PDB Chains (31)

Chain ID Date inserted into CATH CATH Status
1 14 Feb, 2011 Rejected
2 14 Feb, 2011 Holding pen
3 14 Feb, 2011 Chopped
4 14 Feb, 2011 Chopped
5 14 Feb, 2011 Chopped
A 14 Feb, 2011 Rejected
B 14 Feb, 2011 Rejected
C 14 Feb, 2011 Holding pen
D 14 Feb, 2011 Holding pen
E 14 Feb, 2011 Holding pen
F 14 Feb, 2011 Chopped
G 14 Feb, 2011 Chopped
H 14 Feb, 2011 Chopped
I 14 Feb, 2011 Rejected
J 14 Feb, 2011 Chopped
K 14 Feb, 2011 Chopped
L 14 Feb, 2011 Chopped
M 14 Feb, 2011 Chopped
N 14 Feb, 2011 Chopped
O 14 Feb, 2011 Chopped
P 14 Feb, 2011 Holding pen
Q 14 Feb, 2011 Chopped
R 14 Feb, 2011 Chopped
S 14 Feb, 2011 Chopped
T 14 Feb, 2011 Chopped
U 14 Feb, 2011 Chopped
V 14 Feb, 2011 Chopped
W 14 Feb, 2011 Chopped
X 14 Feb, 2011 Holding pen
Y 14 Feb, 2011 Chopped
Z 14 Feb, 2011 Chopped

CATH Domains (24)

Domain ID Date inserted into CATH Superfamily CATH Status
3pyr300 19 Feb, 2011 Holding pen
3pyr400 19 Feb, 2011 Holding pen
3pyr500 01 Feb, 2013 Holding pen
3pyrF00 19 Feb, 2011 Holding pen
3pyrG01 19 Feb, 2011 3.90.930.12 Assigned
3pyrG02 19 Feb, 2011 3.90.930.12 Assigned
3pyrH01 19 Feb, 2011 3.40.5.10 Assigned
3pyrH02 19 Feb, 2011 3.10.430.100 Assigned
3pyrJ00 19 Feb, 2011 3.90.1180.10 Assigned
3pyrK00 19 Feb, 2011 2.40.150.20 Assigned
3pyrL01 18 Mar, 2013 Holding pen
3pyrM01 19 Feb, 2011 3.90.1170.10 Assigned
3pyrN00 19 Feb, 2011 3.90.1030.10 Assigned
3pyrO01 19 Feb, 2011 Holding pen
3pyrQ00 30 Jan, 2013 Holding pen
3pyrR00 19 Feb, 2011 Holding pen
3pyrS00 08 Feb, 2013 3.90.470.10 Assigned
3pyrT00 19 Feb, 2011 3.30.70.330 Assigned
3pyrU00 13 Jul, 2011 Holding pen
3pyrV01 19 Feb, 2011 2.40.240.10 Assigned
3pyrV02 19 Feb, 2011 2.170.120.20 Assigned
3pyrW01 19 Feb, 2011 Holding pen
3pyrY00 06 Feb, 2013 Holding pen
3pyrZ00 19 Feb, 2011 3.30.1390.20 Assigned

Uniprot Entries (21)

Accession Gene ID Taxon Description
Q72I09 RL22_THET2 Thermus thermophilus HB27 50S ribosomal protein L22
Q72I11 RL16_THET2 Thermus thermophilus HB27 50S ribosomal protein L16
Q72IN1 RL13_THET2 Thermus thermophilus HB27 50S ribosomal protein L13
Q72HR3 RL27_THET2 Thermus thermophilus HB27 50S ribosomal protein L27
Q72I05 RL4_THET2 Thermus thermophilus HB27 50S ribosomal protein L4
Q72I19 RL6_THET2 Thermus thermophilus HB27 50S ribosomal protein L6
Q72I16 RL5_THET2 Thermus thermophilus HB27 50S ribosomal protein L5
Q72I23 RL15_THET2 Thermus thermophilus HB27 50S ribosomal protein L15
Q72I06 RL23_THET2 Thermus thermophilus HB27 50S ribosomal protein L23
Q72I12 RL29_THET2 Thermus thermophilus HB27 50S ribosomal protein L29
Q72I04 RL3_THET2 Thermus thermophilus HB27 50S ribosomal protein L3
Q72G84 RL28_THET2 Thermus thermophilus HB27 50S ribosomal protein L28
Q72I14 RL14_THET2 Thermus thermophilus HB27 50S ribosomal protein L14
Q72GV5 RL9_THET2 Thermus thermophilus HB27 50S ribosomal protein L9
Q72I33 RL17_THET2 Thermus thermophilus HB27 50S ribosomal protein L17
Q72L76 RL20_THET2 Thermus thermophilus HB27 50S ribosomal protein L20
Q72I20 RL18_THET2 Thermus thermophilus HB27 50S ribosomal protein L18
Q72I07 RL2_THET2 Thermus thermophilus HB27 50S ribosomal protein L2
Q72IA7 RL25_THET2 Thermus thermophilus HB27 General stress protein CTC
Q72I22 RL30_THET2 Thermus thermophilus HB27 50S ribosomal protein L30
Q72I15 RL24_THET2 Thermus thermophilus HB27 50S ribosomal protein L24