PDB 3dxj

PDB Information

PDB3DXJ
MethodX-RAY DIFFRACTION
Host Organism
Gene Source
Primary Citation
The RNA polymerase "switch region" is a target for inhibitors.
Mukhopadhyay, J., Das, K., Ismail, S., Koppstein, D., Jang, M., Hudson, B., Sarafianos, S., Tuske, S., Patel, J., Jansen, R., Irschik, H., Arnold, E., Ebright, R.H.
Cell(Cambridge,Mass.)
HeaderTranscription,Transferase
Released2008-07-24
Resolution3.000
CATH Insert Date16 Oct, 2008

PDB Images (57)

PDB Prints

PDB Chains (12)

Chain ID Date inserted into CATH CATH Status
A 16 Oct, 2008 Chopped
B 16 Oct, 2008 Chopped
C 16 Oct, 2008 Chopped
D 16 Oct, 2008 Chopped
E 16 Oct, 2008 Chopped
F 16 Oct, 2008 Chopped
K 16 Oct, 2008 Chopped
L 16 Oct, 2008 Chopped
M 16 Oct, 2008 Chopped
N 16 Oct, 2008 Chopped
O 16 Oct, 2008 Chopped
P 16 Oct, 2008 Chopped

CATH Domains (44)

Domain ID Date inserted into CATH Superfamily CATH Status
3dxjA01 17 Oct, 2008 3.30.1360.10 Assigned
3dxjA02 17 Oct, 2008 2.170.120.12 Assigned
3dxjB01 17 Oct, 2008 3.30.1360.10 Assigned
3dxjB02 17 Oct, 2008 2.170.120.12 Assigned
3dxjC01 17 Oct, 2008 2.40.270.10 Assigned
3dxjC02 17 Oct, 2008 3.90.1100.10 Assigned
3dxjC03 17 Oct, 2008 3.90.1110.10 Assigned
3dxjC04 17 Oct, 2008 2.30.150.10 Assigned
3dxjC05 17 Oct, 2008 2.40.50.100 Assigned
3dxjC06 17 Oct, 2008 2.40.50.150 Assigned
3dxjD01 05 Jul, 2018 Holding pen
3dxjD02 05 Jul, 2018 Holding pen
3dxjD03 05 Jul, 2018 Holding pen
3dxjD04 05 Jul, 2018 2.40.50.100 Assigned
3dxjD05 05 Jul, 2018 2.40.40.20 Assigned
3dxjD06 05 Jul, 2018 1.10.274.100 Assigned
3dxjD07 05 Jul, 2018 1.10.132.30 Assigned
3dxjD08 05 Jul, 2018 Holding pen
3dxjE00 17 Oct, 2008 3.90.940.10 Assigned
3dxjF01 17 Oct, 2008 1.20.120.1810 Assigned
3dxjF02 17 Oct, 2008 1.10.10.10 Assigned
3dxjF03 17 Oct, 2008 1.10.10.10 Assigned
3dxjK01 17 Oct, 2008 3.30.1360.10 Assigned
3dxjK02 17 Oct, 2008 2.170.120.12 Assigned
3dxjL01 17 Oct, 2008 3.30.1360.10 Assigned
3dxjL02 17 Oct, 2008 2.170.120.12 Assigned
3dxjM01 17 Oct, 2008 2.40.270.10 Assigned
3dxjM02 17 Oct, 2008 3.90.1100.10 Assigned
3dxjM03 17 Oct, 2008 3.90.1110.10 Assigned
3dxjM04 17 Oct, 2008 2.30.150.10 Assigned
3dxjM05 17 Oct, 2008 2.40.50.100 Assigned
3dxjM06 17 Oct, 2008 2.40.50.150 Assigned
3dxjN01 03 Jul, 2018 Holding pen
3dxjN02 03 Jul, 2018 Holding pen
3dxjN03 03 Jul, 2018 Write scan list
3dxjN04 03 Jul, 2018 2.40.50.100 Assigned
3dxjN05 03 Jul, 2018 2.40.40.20 Assigned
3dxjN06 03 Jul, 2018 1.10.274.100 Assigned
3dxjN07 03 Jul, 2018 1.10.132.30 Assigned
3dxjN08 03 Jul, 2018 Holding pen
3dxjO00 17 Oct, 2008 3.90.940.10 Assigned
3dxjP01 17 Oct, 2008 1.20.120.1810 Assigned
3dxjP02 17 Oct, 2008 1.10.10.10 Assigned
3dxjP03 17 Oct, 2008 1.10.10.10 Assigned

UniProtKB Entries (12)

Accession Gene ID Taxon Description
Q5SHR6 RPOA_THET8 Thermus thermophilus HB8 DNA-directed RNA polymerase subunit alpha
Q8RQE9 RPOB_THET8 Thermus thermophilus HB8 DNA-directed RNA polymerase subunit beta
Q8RQE9 RPOB_THET8 Thermus thermophilus HB8 DNA-directed RNA polymerase subunit beta
Q5SKW1 Q5SKW1_THET8 Thermus thermophilus HB8 RNA polymerase sigma factor SigA
Q8RQE7 RPOZ_THET8 Thermus thermophilus HB8 DNA-directed RNA polymerase subunit omega
Q5SHR6 RPOA_THET8 Thermus thermophilus HB8 DNA-directed RNA polymerase subunit alpha
Q8RQE8 RPOC_THET8 Thermus thermophilus HB8 DNA-directed RNA polymerase subunit beta'
Q8RQE8 RPOC_THET8 Thermus thermophilus HB8 DNA-directed RNA polymerase subunit beta'
Q5SHR6 RPOA_THET8 Thermus thermophilus HB8 DNA-directed RNA polymerase subunit alpha
Q5SKW1 Q5SKW1_THET8 Thermus thermophilus HB8 RNA polymerase sigma factor SigA
Q5SHR6 RPOA_THET8 Thermus thermophilus HB8 DNA-directed RNA polymerase subunit alpha
Q8RQE7 RPOZ_THET8 Thermus thermophilus HB8 DNA-directed RNA polymerase subunit omega