CATH Domain: 7odcA01 XML data for domain: 7odcA01

Molscript image for 7odcA01
7odcA01
PDB coordinates for domain 7odcA01

PDB 7odc, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.40 Beta Barrel
2.40.37 Lyase, Ornithine Decarboxylase; Chain A, domain 1
2.40.37.10 Lyase, Ornithine Decarboxylase; Chain A, domain 1 Gene3D
2.40.37.10.5
2.40.37.10.5.1
2.40.37.10.5.1.1
2.40.37.10.5.1.1.1
2.40.37.10.5.1.1.1.1

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Segment boundaries for domain 7odcA01

Chopping figure for domain 7odcA01
DomainStart PDB ResidueStop PDB Residue
7odcA01 2 47
7odcA01 280 418
7odcA02 48 279

Structural Neighbourhood (1 entries)

There are 1 matching structural neighberhood comparisons for CATH ID 2.40.37.10.5.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 1 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1d7kB01 92.34 Arginine and proline metabolismOrnithine decarboxylase activityGlutathione metabolismOrnithine decarboxylase [EC:4.1.1.17]Protein binding 2.40.37.10 133 90 77 1.16 1.50
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Displaying entries 1 to 1 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|7odcA01
SSFTKDEFDCHILDEGFTAKDILDQKINDKDAFYVADLGDVASAFTLAVNIIAKKTVWEQTFMYYVNDGVYGSFNCILYD
HAHVKALLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGAYTVAAASTFNGFQRPNIYYVMSRP
MWQLMK
BLAST against CATH

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Domain COMBS Sequence 

>pdb|7odcA01
MSSFTKDEFDCHILDEGFTAKDILDQKINEVSSSDDKDAFYVADLGDVASAFTLAVNIIAKKTVWKEQPGSDDEDESNEQ
TFMYYVNDGVYGSFNCILYDHAHVKALLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGAYTVA
AASTFNGFQRPNIYYVMSRPMWQLMKQIQSHG
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:29

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:29

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 18:00

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"