CATH Domain: 3fv9A02 XML data for domain: 3fv9A02

Molscript image for 3fv9A02
3fv9A02
PDB coordinates for domain 3fv9A02

PDB 3fv9, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.20 Alpha-Beta Barrel
3.20.20 TIM Barrel
3.20.20.120 Enolase superfamily Gene3D
3.20.20.120.10
3.20.20.120.10.1
3.20.20.120.10.1.1
3.20.20.120.10.1.1.1
3.20.20.120.10.1.1.1.1

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Segment boundaries for domain 3fv9A02

Chopping figure for domain 3fv9A02
DomainStart PDB ResidueStop PDB Residue
3fv9A01 1 118
3fv9A01 362 374
3fv9A02 119 361

Structural Neighbourhood (28 entries)

There are 28 matching structural neighberhood comparisons for CATH ID 3.20.20.120.10.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 28 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2qddA02 89.90 Mandelate racemase/muconate lactonizing enzyme, putativeRoseovarius nubinhibens ISM 3.20.20.120 236 34 96 1.51 1.56
2pmqA02 88.64 Roseovarius sp. HTCC2601Mandelate racemase/muconate lactonizing enzyme 3.20.20.120 224 27 91 1.59 1.73
1tkkA02 86.98 Bacillus subtilisL-Ala-D/L-Glu epimerase 3.20.20.120 244 24 96 2.06 2.13
2qdeA02 86.54 Aromatoleum aromaticum EbN1Mandelate racemase/muconate lactonizing enzyme family protein 3.20.20.120 239 19 93 2.46 2.63
2oqhA02 85.52 Putative isomeraseStreptomyces coelicolor 3.20.20.120 240 24 92 1.97 2.14
3bjsA02 84.53 Polaromonas sp. JS666Mandelate racemase/muconate lactonizing enzyme 3.20.20.120 250 21 91 2.32 2.54
3cb3A02 84.39 Toluene and xylene degradationPolaromonas sp. JS666Mandelate racemase [EC:5.1.2.2]Mandelate racemase/muconate lactonizing enzymeBenzoate degradation via hydroxylation 3.20.20.120 233 22 93 2.85 3.04
2pgwA02 84.16 Sinorhizobium melilotiToluene and xylene degradationBenzoate degradation via hydroxylationMuconate cycloisomerase [EC:5.5.1.1]Mandelate racemase/muconate lactonizing enzyme family protein 3.20.20.120 215 22 87 2.32 2.66
2ovlA02 84.06 Toluene and xylene degradationStreptomyces coelicolorMandelate racemase [EC:5.1.2.2]Benzoate degradation via hydroxylationPutative racemase 3.20.20.120 223 22 90 2.51 2.79
2qvhA02 83.88 Ubiquinone and other terpenoid-quinone biosynthesisThermobifida fusca YXO-succinylbenzoate-CoA synthaseO-succinylbenzoate synthase [EC:4.2.1.113]Metabolic pathways 3.20.20.120 224 25 91 2.92 3.18
1mdlA02 83.86 Mandelate racemasePseudomonas putida 3.20.20.120 230 20 93 2.45 2.63
1ec7A02 83.44 Ascorbate and aldarate metabolismD-glucarate catabolic processGlucarate dehydratase activityGlucarate dehydrataseGlucarate dehydratase [EC:4.2.1.40] 3.20.20.120 261 16 85 2.38 2.79
2oqyA02 83.14 Muconate cycloisomeraseOceanobacillus iheyensis 3.20.20.120 226 17 89 2.74 3.07
2chrA02 83.02 Ralstonia eutropha JMP134Chloromuconate cycloisomeraseToluene and xylene degradationMuconate cycloisomerase [EC:5.5.1.1]Benzoate degradation via hydroxylation 3.20.20.120 202 16 81 2.36 2.88
2hzgA02 83.00 Rhodobacter sphaeroides 2.4.1Mandelate racemase/muconate lactonizing enzyme/Enolase superfamily 3.20.20.120 248 20 94 2.89 3.05
1jpdX02 82.68 Racemase and epimerase activity, acting on amino acids and derivativesL-Ala-D/L-Glu epimeraseEscherichia coli K-12 3.20.20.120 207 21 84 2.47 2.91
2qq6A02 82.52 Rubrobacter xylanophilus DSM 9941Mandelate racemase/muconate lactonizing enzyme-like protein 3.20.20.120 262 14 86 2.61 3.01
1yeyB02 82.48 Xanthomonas campestris pv. campestrisRTS beta protein 3.20.20.120 243 16 89 2.88 3.21
2oz8A02 82.42 Mesorhizobium lotiMll7089 protein 3.20.20.120 230 23 90 2.98 3.28
3go2A02 81.84 Burkholderia xenovorans LB400Putative uncharacterized protein 3.20.20.120 268 16 86 2.97 3.43
2pozH02 81.72 Putative dehydrataseMesorhizobium loti 3.20.20.120 246 18 91 2.59 2.84
2podB02 81.67 Mandelate racemase / muconate lactonizing enzymeBurkholderia pseudomallei 3.20.20.120 251 14 89 2.74 3.06
3cyjA02 81.62 Rubrobacter xylanophilus DSM 9941Mandelate racemase/muconate lactonizing enzyme-like proteinToluene and xylene degradationMandelate racemase [EC:5.1.2.2]Benzoate degradation via hydroxylation 3.20.20.120 235 22 92 3.09 3.34
2nqlA02 81.61 Agrobacterium tumefaciens str. C58Isomerase/lactonizing enzyme 3.20.20.120 214 21 86 2.84 3.29
2oztA02 81.21 Ubiquinone and other terpenoid-quinone biosynthesisThermosynechococcus elongatus BP-1O-succinylbenzoate synthase [EC:4.2.1.113]Tlr1174 proteinMetabolic pathways 3.20.20.120 201 18 80 2.81 3.50
1tzzA02 80.72 Bradyrhizobium japonicumBll6730 protein 3.20.20.120 256 16 89 3.22 3.60
1r6wA01 80.64 Ubiquinone and other terpenoid-quinone biosynthesisMetabolic pathwaysMenaquinone biosynthetic processO-succinylbenzoate synthaseHydro-lyase activity 3.20.20.120 198 16 79 2.87 3.59
3cawA02 80.60 Ubiquinone and other terpenoid-quinone biosynthesisO-succinylbenzoate synthase [EC:4.2.1.113]Bdellovibrio bacteriovorusMetabolic pathwaysPutative uncharacterized protein 3.20.20.120 225 12 88 2.97 3.37
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Displaying entries 1 to 28 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|3fv9A02
LPLCDMTGGRVAGPVPVISSIGGDTPEAMRAKVARHRAQGFKGHSIKIGASEAEGGPALDAERITACLADRQPGEWYLAD
ANNGLTVEHALRMLSLLPPGLDIVLEAPCASWAETKSLRARCALPLLLDELIQTETDLIAAIRDDLCDGVGLKVSKQGGI
TPMLRQRAIAAAAGMVMSVQDTVGSQISFAAILHLAQSTPRHLLRCALDTRAMTTAELAEIDAPLRDGGASAPSDPGLGL
RVN
BLAST against CATH

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Domain COMBS Sequence 

>pdb|3fv9A02
LPLCDMTGGRVAGPVPVISSIGGDTPEAMRAKVARHRAQGFKGHSIKIGASEAEGGPALDAERITACLADRQPGEWYLAD
ANNGLTVEHALRMLSLLPPGLDIVLEAPCASWAETKSLRARCALPLLLDELIQTETDLIAAIRDDLCDGVGLKVSKQGGI
TPMLRQRAIAAAAGMVMSVQDTVGSQISFAAILHLAQSTPRHLLRCALDTRAMTTAELAEIDAPLRDGGASAPSDPGLGL
RVN
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 03 Mar 2009 21:26

Assigning to "3.20.20.120" based on similarity with "2pceA02"

Flow stage update by auto on 03 Mar 2009 20:58

No in_process hits for Domain "3fv9A02" ready to be processed

Flow stage update by auto on 03 Mar 2009 20:57

NW result present for Domain "3fv9A02"

Flow stage update by auto on 19 Feb 2009 11:52

All required files are present for Domain "3fv9A02"

Flow stage update by auto on 18 Feb 2009 18:12

Beginning processing for Domain "3fv9A02"

Insertion by auto on 18 Feb 2009 16:59

Final ChopClose added based on similarity with "2pceA"