CATH Domain: 3fiaA00 XML data for domain: 3fiaA00

Molscript image for 3fiaA00
3fiaA00
PDB coordinates for domain 3fiaA00

PDB 3fia, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.238 Recoverin; domain 1
1.10.238.10 EF-hand Gene3D
1.10.238.10.4
1.10.238.10.4.1
1.10.238.10.4.1.1
1.10.238.10.4.1.1.1
1.10.238.10.4.1.1.1.1

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Segment boundaries for domain 3fiaA00

Chopping figure for domain 3fiaA00
DomainStart PDB ResidueStop PDB Residue
3fiaA00 6 103

Structural Neighbourhood (10 entries)

There are 10 matching structural neighberhood comparisons for CATH ID 1.10.238.10.4.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 10 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1c07A00 86.95 Plasma membraneClathrin coat assemblyEpidermal growth factor receptor substrate 15Homo sapiensEpidermal growth factor receptor signaling pathway 1.10.238.10 95 35 90 2.27 2.51
2bl0B01 79.62 Physarum polycephalumMyosin regulatory light chain 1.10.238.10 68 10 68 3.18 4.67
1tizA00 79.13 Calcium-binding protein CMLArabidopsis thalianaPlant-pathogen interactionProbable calcium-binding protein CML34 1.10.238.10 66 12 64 2.27 3.50
1qx2A00 78.99 Protein S100-GBos taurus 1.10.238.10 75 13 69 3.39 4.90
1eg3A04 78.91 Cell surfaceCostamereCytoskeletonDystrophin-associated glycoprotein complexActin binding 1.10.238.10 82 9 70 3.25 4.63
2f3yA02 77.55 Phosphatidylinositol signaling systemCalcium signaling pathwayOocyte meiosisMelanogenesisInsulin signaling pathway 1.10.238.10 68 16 67 3.33 4.97
2z4sA02 76.44 Thermotoga maritimaTwo-component systemChromosomal replication initiator proteinChromosomal replication initiator protein dnaA 1.10.8.60 72 12 54 2.66 4.90
1m45A02 76.20 Vesicle targetingIdentical protein bindingMyosin II heavy chain bindingProtein localizationVesicle 1.10.238.10 75 9 72 3.56 4.92
1m45A01 75.12 Vesicle targetingIdentical protein bindingProtein localizationMyosin II heavy chain bindingMyosin light chain 1 1.10.238.10 67 7 65 3.24 4.91
1djxB01 74.25 Calcium ion bindingCalcium signaling pathwayPhosphatidylinositol signaling systemRattus norvegicusElevation of cytosolic calcium ion concentration involved in G-protein signaling coupled to IP3 second messenger 1.10.238.10 52 9 50 1.90 3.80
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Displaying entries 1 to 10 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|3fiaA00
TPFGGSLDTWAITVEERAKHDQQFHSLKPISGFITGDQARNFFFQSGLPQPVLAQIWALADNNDGRDQVEFSIAKLIKLK
LQGYQLPSALPPVK
BLAST against CATH

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Domain COMBS Sequence 

>pdb|3fiaA00
XGHHHHHHSHVAQFPTPFGGSLDTWAITVEERAKHDQQFHSLKPISGFITGDQARNFFFQSGLPQPVLAQIWALADXNND
GRXDQVEFSIAXKLIKLKLQGYQLPSALPPVXKQQPVAISS
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 11 Jan 2009 12:09

Assigning to "1.10.238.10" based on similarity with "1iq3A00"

Flow stage update by auto on 11 Jan 2009 11:35

No in_process hits for Domain "3fiaA00" ready to be processed

Flow stage update by auto on 11 Jan 2009 11:35

NW result present for Domain "3fiaA00"

Flow stage update by auto on 09 Jan 2009 08:49

All required files are present for Domain "3fiaA00"

Flow stage update by auto on 08 Jan 2009 20:48

Beginning processing for Domain "3fiaA00"

Insertion by auto on 08 Jan 2009 20:07

Final ChopClose added based on similarity with "1iq3A"