CATH Domain: 3etrA01 XML data for domain: 3etrA01

Molscript image for 3etrA01
3etrA01
PDB coordinates for domain 3etrA01

PDB 3etr, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.10 Roll
3.10.20 Ubiquitin-like (UB roll)
3.10.20.30 Gene3D
3.10.20.30.16
3.10.20.30.16.1
3.10.20.30.16.1.1
3.10.20.30.16.1.1.1
3.10.20.30.16.1.1.1.1

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Segment boundaries for domain 3etrA01

Chopping figure for domain 3etrA01
DomainStart PDB ResidueStop PDB Residue
3etrA01 3 87
3etrA02 92 165

Structural Neighbourhood (14 entries)

There are 14 matching structural neighberhood comparisons for CATH ID 3.10.20.30.16.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 14 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1c1yB00 80.12 RAF proto-oncogene serine/threonine-protein kinaseNeurotrophin signaling pathwayNon-small cell lung cancerT cell receptor signaling pathwayProtein binding 3.10.20.90 77 12 78 2.72 3.45
1zud400 79.48 Sulfur carrier protein ThiSThiamine biosynthesis ThiSEscherichia coli K-12 3.10.20.30 66 7 65 2.63 3.99
1wxmA01 79.36 Bladder cancerPathways in cancerNon-small cell lung cancerAcute myeloid leukemiaProtein binding 3.10.20.90 71 12 74 2.81 3.79
1ryjA00 78.39 Methanothermobacter thermautotrophicus str. Delta HPutative uncharacterized protein 3.10.20.30 70 10 68 2.36 3.46
1tygB00 76.59 Sulfur carrier protein ThiSThiamine biosynthesis ThiSBacillus subtilis 3.10.20.30 65 13 65 2.95 4.48
1wx9A00 76.24 Large proline-rich protein BAT3Homo sapiensProtein binding 3.10.20.90 86 2 70 2.87 4.05
3cwiA00 76.15 Thiamine biosynthesis ThiSGeobacter metallireducens GS-15ThiS, thiamine-biosynthesis 3.10.20.30 67 20 67 3.19 4.76
2kd0A01 75.81 LRR repeats and ubiquitin-like domain-containing protein At2g30105Arabidopsis thaliana 3.10.20.90 71 8 72 3.49 4.78
1oqyA01 75.56 Nucleotide excision repairNucleotide-excision repairUV excision repair protein RAD23 homolog ASingle-stranded DNA bindingHomo sapiens 3.10.20.90 79 7 77 3.49 4.49
1y8rC00 74.93 Nuclear poreNegative regulation of transcriptionSmall ubiquitin-related modifier 1Protein sumoylationProtein binding 3.10.20.90 84 4 74 3.59 4.84
1wm3A00 74.78 Small ubiquitin-related modifierHomo sapiensSmall ubiquitin-related modifier 2Protein sumoylationProtein binding 3.10.20.90 72 8 65 3.26 4.95
1lfdA00 74.62 Rattus norvegicusRal guanine nucleotide dissociation stimulatorSmall GTPase mediated signal transduction 3.10.20.90 87 5 77 3.51 4.56
2he7A01 74.31 Tight junctionErythrocyte membrane protein band 4.1Homo sapiensBand 4.1-like protein 3Cell-cell junction 3.10.20.90 80 7 82 4.08 4.95
1h4rA01 74.07 Negative regulation of cell-cell adhesionSchwann cell proliferationCytoskeletonNucleolusEarly endosome 3.10.20.90 78 12 80 3.58 4.47
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Displaying entries 1 to 14 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|3etrA01
ADELVFFVNGKKVVEKNADPETTLLAYLRRKLGLRGTKLGCGEGGCGACTVMLSKYDRLQDKIIHFSANACLAPICTLHH
VAVTT
BLAST against CATH

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Domain COMBS Sequence 

>pdb|3etrA01
ADELVFFVNGKKVVEKNADPETTLLAYLRRKLGLRGTKLGCGEGGCGACTVMLSKYDRLQDKIIHFSANACLAPICTLHH
VAVTT
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 03 Mar 2009 21:24

Assigning to "3.10.20.30" based on similarity with "1fiqA01"

Flow stage update by auto on 03 Mar 2009 20:58

No in_process hits for Domain "3etrA01" ready to be processed

Flow stage update by auto on 03 Mar 2009 20:57

NW result present for Domain "3etrA01"

Flow stage update by auto on 19 Feb 2009 11:52

All required files are present for Domain "3etrA01"

Flow stage update by auto on 18 Feb 2009 18:12

Beginning processing for Domain "3etrA01"

Insertion by auto on 18 Feb 2009 16:50

Final ChopClose added based on similarity with "1fiqA"