CATH Domain: 3ef4A00 XML data for domain: 3ef4A00

Molscript image for 3ef4A00
3ef4A00
PDB coordinates for domain 3ef4A00

PDB 3ef4, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.40 Immunoglobulin-like
2.60.40.420 Cupredoxins - blue copper proteins Gene3D
2.60.40.420.9
2.60.40.420.9.1
2.60.40.420.9.1.1
2.60.40.420.9.1.1.1
2.60.40.420.9.1.1.1.1

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Segment boundaries for domain 3ef4A00

Chopping figure for domain 3ef4A00
DomainStart PDB ResidueStop PDB Residue
3ef4A00 1 124

Structural Neighbourhood (7 entries)

There are 7 matching structural neighberhood comparisons for CATH ID 2.60.40.420.9.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 7 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3cvbA00 84.51 PlastocyaninPhormidium laminosum 2.60.40.420 102 23 72 2.25 3.10
1kdjA00 83.08 Identical protein bindingPlastocyaninDryopteris crassirhizoma 2.60.40.420 102 18 71 2.62 3.65
2ov0A00 82.69 Paracoccus denitrificansAmicyanin 2.60.40.420 105 20 66 1.98 2.96
1ibyA00 78.79 Chain A, Red Copper Protein NitrosocyaninNitrosomonas europaea 2.60.40.420 112 10 70 3.42 4.82
1qhqA00 77.67 Copper ion bindingPlasma membraneChloroflexus aurantiacus J-10-flAuracyanin-BPhotosynthetic electron transport chain 2.60.40.420 139 12 61 2.61 4.27
1fwxA02 77.12 Paracoccus denitrificansNitrous-oxide reductase 2.60.40.420 121 14 65 2.60 3.98
2cuaB00 76.29 Cytochrome c oxidase subunit 2Thermus thermophilus 2.60.40.420 132 10 61 2.59 4.22
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Displaying entries 1 to 7 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|3ef4A00
AEHIVEMRNKDDAGNTMVFQPGFVKVEAGDTVKFVPTDKSHNAESVREVWPEGVAPVKGGFSKEVVFNAEKEGLYVLKCA
PHYGMGMVVLVQVGKPVNLDQIKEYKATGLAKKRLDGEIAKVVQ
BLAST against CATH

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Domain COMBS Sequence 

>pdb|3ef4A00
AEHIVEMRNKDDAGNTMVFQPGFVKVEAGDTVKFVPTDKSHNAESVREVWPEGVAPVKGGFSKEVVFNAEKEGLYVLKCA
PHYGMGMVVLVQVGKPVNLDQIKEYKATGLAKKRLDGEIAKVVQ
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 10 Jan 2009 17:48

Assigning to "2.60.40.420" based on similarity with "1adwA00"

Flow stage update by auto on 10 Jan 2009 17:30

No in_process hits for Domain "3ef4A00" ready to be processed

Flow stage update by auto on 10 Jan 2009 17:30

NW result present for Domain "3ef4A00"

Flow stage update by auto on 07 Jan 2009 10:18

All required files are present for Domain "3ef4A00"

Flow stage update by auto on 07 Jan 2009 06:00

Beginning processing for Domain "3ef4A00"

Insertion by auto on 07 Jan 2009 05:35

Final ChopClose added based on similarity with "1adwA"