CATH Domain: 3edgA00 XML data for domain: 3edgA00

Molscript image for 3edgA00
3edgA00
PDB coordinates for domain 3edgA00

PDB 3edg, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.390 Collagenase (Catalytic Domain)
3.40.390.10 Collagenase (Catalytic Domain) Gene3D
3.40.390.10.2
3.40.390.10.2.1
3.40.390.10.2.1.1
3.40.390.10.2.1.1.1
3.40.390.10.2.1.1.1.1

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Segment boundaries for domain 3edgA00

Chopping figure for domain 3edgA00
DomainStart PDB ResidueStop PDB Residue
3edgA00 1 200

Structural Neighbourhood (1 entries)

There are 1 matching structural neighberhood comparisons for CATH ID 3.40.390.10.2.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 1 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1iabA00 90.27 AstacinAstacus astacus 3.40.390.10 200 35 94 1.48 1.57
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Displaying entries 1 to 1 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|3edgA00
AATSRPERVWPDGVIPFVIGGNFTGSQRAVFRQAMRHWEKHTCVTFLERTDEDSYIVFTYRPCGSYVGRRGGGPQAISIG
KNCDKFGIVVHELGHVVGFWHEHTRPDRDRHVSIVRENIQPGQEYNFLKMEPQEVESLGETYDFDSIMHYARNTFSRGIF
LDTIVPKYEKPPIGQRTRLSKGDIAQARKLYKCPA
BLAST against CATH

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Domain COMBS Sequence 

>pdb|3edgA00
MAATSRPERVWPDGVIPFVIGGNFTGSQRAVFRQAMRHWEKHTCVTFLERTDEDSYIVFTYRPCGCCSYVGRRGGGPQAI
SIGKNCDKFGIVVHELGHVVGFWHEHTRPDRDRHVSIVRENIQPGQEYNFLKMEPQEVESLGETYDFDSIMHYARNTFSR
GIFLDTIVPKYEVNGVKPPIGQRTRLSKGDIAQARKLYKCPA
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 21 Sep 2008 20:28

Assigning to "3.40.390.10" based on similarity with "1astA00"

Flow stage update by auto on 21 Sep 2008 20:11

No in_process hits for Domain "3edgA00" ready to be processed

Flow stage update by auto on 21 Sep 2008 20:11

NW result present for Domain "3edgA00"

Flow stage update by auto on 21 Sep 2008 11:14

All required files are present for Domain "3edgA00"

Flow stage update by auto on 20 Sep 2008 14:13

Beginning processing for Domain "3edgA00"

Insertion by auto on 20 Sep 2008 14:06

Final ChopClose added based on similarity with "1astA"