CATH Domain: 3ed6A01 XML data for domain: 3ed6A01

Molscript image for 3ed6A01
3ed6A01
PDB coordinates for domain 3ed6A01

PDB 3ed6, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.605 Aldehyde Dehydrogenase; Chain A, domain 1
3.40.605.10 Aldehyde Dehydrogenase; Chain A, domain 1 Gene3D
3.40.605.10.4
3.40.605.10.4.1
3.40.605.10.4.1.1
3.40.605.10.4.1.1.1
3.40.605.10.4.1.1.1.1

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Segment boundaries for domain 3ed6A01

Chopping figure for domain 3ed6A01
DomainStart PDB ResidueStop PDB Residue
3ed6A01 -5 257
3ed6A01 452 496
3ed6A02 258 451

Structural Neighbourhood (8 entries)

There are 8 matching structural neighberhood comparisons for CATH ID 3.40.605.10.4.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 8 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2w8nA01 90.99 Succinate-semialdehyde dehydrogenase activitySoluble fractionGamma-aminobutyric acid catabolic processCentral nervous system developmentMetabolic pathways 3.40.605.10 289 32 92 1.32 1.42
3k2wB01 89.70 Betaine-aldehyde dehydrogenaseLactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21]Pseudoalteromonas atlantica T6cPyruvate metabolismGlyoxylate and dicarboxylate metabolism 3.40.605.10 292 36 94 1.50 1.59
1t90A01 88.33 Methylmalonate semialdehyde dehydrogenase [acylating]Bacillus subtilisMethylmalonate-semialdehyde dehydrogenase [EC:1.2.1.27]Valine, leucine and isoleucine degradationPropanoate metabolism 3.40.605.10 280 30 90 1.91 2.12
1euhA01 87.86 Glyceraldehyde-3-phosphate dehydrogenase (NADP) [EC:1.2.1.9]Glycolysis / GluconeogenesisNADP-dependent glyceraldehyde-3-phosphate dehydrogenaseMetabolic pathwaysStreptococcus mutans 3.40.605.10 274 26 87 1.64 1.88
1uxtA01 87.16 Thermoproteus tenaxGlyceraldehyde-3-phosphate dehydrogenase (NADP+) 3.40.605.10 273 26 87 1.98 2.27
1a4sA01 86.33 Betaine aldehyde dehydrogenaseGadus callarias 3.40.605.10 260 32 83 1.93 2.32
1ad3A01 81.42 Tyrosine metabolismRattus norvegicusResponse to glucocorticoid stimulus3-chloroallyl aldehyde dehydrogenase activityCytosol 3.40.605.10 247 21 77 2.62 3.39
1o20A01 79.69 Thermotoga maritimaGamma-glutamyl phosphate reductaseArginine and proline metabolismGlutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]Metabolic pathways 3.40.605.10 263 14 77 3.59 4.63
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Displaying entries 1 to 8 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|3ed6A01
YFQSNAMELLKHLSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEWSQETAETRGK
KVRAIADKIKEHREALARLETLDTGKTLEESYADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQIT
PWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGG
IETGKHIMKNAANNVTNIALELGAQAPWGGYKQSGIGRELGKEGLEEYLVSKHILTNTNPQLVNWFSK
BLAST against CATH

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Domain COMBS Sequence 

>pdb|3ed6A01
YFQSNAMELLKHLSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEWSQETAETRGK
KVRAIADKIKEHREALARLETLDTGKTLEESYADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQIT
PWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGG
IETGKHIMKNAANNVTNIALELGAQAPWGGYKQSGIGRELGKEGLEEYLVSKHILTNTNPQLVNWFSK
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 28 Sep 2008 20:32

Assigning to "3.40.605.10" based on similarity with "1cw3A01"

Flow stage update by auto on 28 Sep 2008 20:15

No in_process hits for Domain "3ed6A01" ready to be processed

Flow stage update by auto on 28 Sep 2008 20:15

NW result present for Domain "3ed6A01"

Flow stage update by auto on 28 Sep 2008 11:24

All required files are present for Domain "3ed6A01"

Flow stage update by auto on 27 Sep 2008 20:30

Beginning processing for Domain "3ed6A01"

Insertion by auto on 27 Sep 2008 20:19

Final ChopClose added based on similarity with "1cw3A"