CATH Domain: 3dydA01 XML data for domain: 3dydA01

Molscript image for 3dydA01
3dydA01
PDB coordinates for domain 3dydA01

PDB 3dyd, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.90 Alpha-Beta Complex
3.90.1150 Aspartate Aminotransferase, domain 1
3.90.1150.10 Aspartate Aminotransferase, domain 1 Gene3D
3.90.1150.10.26
3.90.1150.10.26.1
3.90.1150.10.26.1.1
3.90.1150.10.26.1.1.1
3.90.1150.10.26.1.1.1.1

Segment boundaries for domain 3dydA01

Chopping figure for domain 3dydA01
DomainStart PDB ResidueStop PDB Residue
3dydA01 64 90
3dydA01 335 444
3dydA02 91 334

Structural Neighbourhood (13 entries)

There are 13 matching structural neighberhood comparisons for CATH ID 3.90.1150.10.26.1.1.1.1 (SIMAX score < 5)

Displaying entries 1 to 13 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1xi9B01 89.84 Pyrococcus furiosusAminotransferase [EC:2.6.1.-]Alanine aminotransferase 3.90.1150.10 144 24 89 2.22 2.48
3ffhA01 82.99 Tyrosine metabolismListeria innocuaHistidinol-phosphate aminotransferase [EC:2.6.1.9]Histidine metabolismPhenylalanine metabolism 3.90.1150.10 131 8 85 3.04 3.56
3ftbA01 82.85 Tyrosine metabolismHistidinol-phosphate aminotransferase [EC:2.6.1.9]Histidine metabolismMetabolic pathwaysPhenylalanine metabolism 3.90.1150.10 112 13 80 2.07 2.58
1c7nA01 82.05 Treponema denticolaHemolysin 3.90.1150.10 164 10 74 2.40 3.23
1m32A01 81.42 2-aminoethylphosphonate--pyruvate transaminaseSalmonella enterica subsp. enterica serovar Typhimurium2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]Phosphonate and phosphinate metabolismMetabolic pathways 3.90.1150.10 110 13 76 2.75 3.59
2oatA01 80.47 Ornithine--oxo-acid transaminase [EC:2.6.1.13]Arginine and proline metabolismOrnithine-oxo-acid transaminase activityVisual perceptionHomo sapiens 3.90.1150.10 154 9 73 3.12 4.25
1arsA01 80.17 Tyrosine metabolismArginine and proline metabolismMetabolic pathwaysPhenylalanine metabolismCysteine and methionine metabolism 3.90.1150.10 115 15 75 3.47 4.62
1jg8A02 80.00 Thermotoga maritimaThreonine aldolase [EC:4.1.2.5]Glycine, serine and threonine metabolismMetabolic pathwaysL-allo-threonine aldolase 3.90.1150.10 96 16 67 2.16 3.18
1iugA01 79.47 Thermus thermophilusAspartate aminotransferase 3.90.1150.10 111 15 78 2.84 3.60
1p3wA01 79.05 Thiamine metabolismCysteine desulfurase activitySelenocysteine lyase activityCysteine desulfuraseIron-sulfur cluster assembly 3.90.1150.10 121 9 75 2.64 3.51
1uu2B01 79.04 Thermotoga maritimaTyrosine metabolismHistidinol-phosphate aminotransferase [EC:2.6.1.9]Histidine metabolismMetabolic pathways 3.90.1150.10 117 12 77 3.73 4.82
3tatA01 77.61 Tyrosine metabolismPhenylalanine metabolismMetabolic pathwaysCysteine and methionine metabolismNovobiocin biosynthesis 3.90.1150.10 155 10 72 3.40 4.66
1eg5B01 76.73 Thermotoga maritimaThiamine metabolismCysteine desulfurase [EC:2.8.1.7]Aminotransferase, class V 3.90.1150.10 106 8 70 3.14 4.48
Displaying entries 1 to 13 (page 1 of 1)


Domain ATOM Sequence

>pdb|3dydA01
KVKPNPNKTMISLSIGDPTVFGNLPTDPGEFYHNTLSFLKSNADLCYGALAAIPGLRPVRPSGAMYLMVGIEMEHFPEFE
NDVEFTERLVAEQSVHCLPATCFEYPNFIRVVITVPEVMMLEACSRIQEFCEQHYHC    

Domain COMBS Sequence

>pdb|3dydA01
KVKPNPNKTMISLSIGDPTVFGNLPTDPGEFYHNTLSFLKSNADLCYGALAAIPGLRPVRPSGAMYLMVGIEMEHFPEFE
NDVEFTERLVAEQSVHCLPATCFEYPNFIRVVITVPEVMMLEACSRIQEFCEQHYHC    

Domain History Events (6)

Domain assigned by auto on 27 Aug 2008 17:23

Assigning to "3.90.1150.10" based on similarity with "1bw0A01"

Flow stage update by auto on 27 Aug 2008 17:08

No in_process hits for Domain "3dydA01" ready to be processed

Flow stage update by auto on 27 Aug 2008 17:08

NW result present for Domain "3dydA01"

Flow stage update by auto on 26 Aug 2008 08:10

All required files are present for Domain "3dydA01"

Flow stage update by auto on 25 Aug 2008 11:31

Beginning processing for Domain "3dydA01"

Insertion by auto on 25 Aug 2008 11:21

Final ChopClose added based on similarity with "1bw0A"