CATH Domain: 3dy0A02 XML data for domain: 3dy0A02

Molscript image for 3dy0A02
3dy0A02
PDB coordinates for domain 3dy0A02

PDB 3dy0, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.30 Roll
2.30.39 Alpha-1-antitrypsin; domain 1
2.30.39.10 Alpha-1-antitrypsin, domain 1 Gene3D
2.30.39.10.5
2.30.39.10.5.1
2.30.39.10.5.1.1
2.30.39.10.5.1.1.1
2.30.39.10.5.1.1.1.1

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Segment boundaries for domain 3dy0A02

Chopping figure for domain 3dy0A02
DomainStart PDB ResidueStop PDB Residue
3dy0A01 26 189
3dy0A01 285 338
3dy0A02 190 284
3dy0A02 344 353

Structural Neighbourhood (5 entries)

There are 5 matching structural neighberhood comparisons for CATH ID 2.30.39.10.5.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 5 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1hp7A01 91.68 Alpha-1-antitrypsinProtease bindingAlpha-1-antitrypsinHomo sapiensExtracellular space 2.30.39.10 95 41 90 2.26 2.50
2h4pA02 89.75 Gallus gallusHeterochromatin-associated protein MENT 2.30.39.10 102 20 89 2.33 2.60
3f02B02 89.54 Peripheral nervous system developmentNeuroserpinHomo sapiensCentral nervous system developmentSerine-type endopeptidase inhibitor activity 2.30.39.10 99 22 89 3.29 3.67
2rivA02 89.18 Thyroxine-binding globulinHomo sapiensExtracellular spaceSerine-type endopeptidase inhibitor activity 2.30.39.10 87 39 82 2.38 2.87
1mtpA02 88.08 Proteinase inhibitor I4, serpinThermobifida fusca YX 2.30.39.10 91 24 86 3.31 3.82
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Displaying entries 1 to 5 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|3dy0A02
WETSFNHKGTQEQDFYVTSETVVRVPMMSREDQYHYLLDRNLSCRVVGVPYQGNATALFILPSEGKMQQVENGLSEKTLR
KWLKMFKKRQLELYLAAATGTIFTF
BLAST against CATH

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Domain COMBS Sequence 

>pdb|3dy0A02
WETSFNHKGTQEQDFYVTSETVVRVPMMSREDQYHYLLDRNLSCRVVGVPYQGNATALFILPSEGKMQQVENGLSEKTLR
KWLKMFKKRQLELYLAAATGTIFTF
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 02 Nov 2008 11:31

Assigning to "2.30.39.10" based on similarity with "1lq8A01"

Flow stage update by auto on 02 Nov 2008 11:08

No in_process hits for Domain "3dy0A02" ready to be processed

Flow stage update by auto on 02 Nov 2008 11:08

NW result present for Domain "3dy0A02"

Flow stage update by auto on 01 Nov 2008 11:18

All required files are present for Domain "3dy0A02"

Flow stage update by auto on 31 Oct 2008 20:11

Beginning processing for Domain "3dy0A02"

Insertion by auto on 31 Oct 2008 20:10

Final ChopClose added based on similarity with "1lq8A"