CATH Domain: 3dgbA01 XML data for domain: 3dgbA01

Molscript image for 3dgbA01
3dgbA01
PDB coordinates for domain 3dgbA01

PDB 3dgb, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.30 2-Layer Sandwich
3.30.390 Enolase-like; domain 1
3.30.390.10 Enolase-like, N-terminal domain Gene3D
3.30.390.10.8
3.30.390.10.8.1
3.30.390.10.8.1.1
3.30.390.10.8.1.1.1
3.30.390.10.8.1.1.1.1

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Segment boundaries for domain 3dgbA01

Chopping figure for domain 3dgbA01
DomainStart PDB ResidueStop PDB Residue
3dgbA01 4 123
3dgbA01 360 373
3dgbA02 124 359

Structural Neighbourhood (22 entries)

There are 22 matching structural neighberhood comparisons for CATH ID 3.30.390.10.8.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 22 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1nu5A01 91.54 Chloromuconate cycloisomerasePseudomonas sp. P51 3.30.390.10 116 39 86 1.41 1.63
3fv9D01 89.53 Mandelate racemase/muconate lactonizing enzyme, putativeRoseovarius nubinhibens ISM 3.30.390.10 130 18 90 1.48 1.64
2ovlA01 89.46 Toluene and xylene degradationStreptomyces coelicolorMandelate racemase [EC:5.1.2.2]Benzoate degradation via hydroxylationPutative racemase 3.30.390.10 123 25 86 1.49 1.72
1tkkA01 89.12 Bacillus subtilisL-Ala-D/L-Glu epimerase 3.30.390.10 115 28 85 1.52 1.77
3bjsA01 88.65 Polaromonas sp. JS666Mandelate racemase/muconate lactonizing enzyme 3.30.390.10 116 27 81 1.69 2.08
1mdlA01 88.53 Mandelate racemasePseudomonas putida 3.30.390.10 126 22 89 1.85 2.07
1ec7C01 88.39 Ascorbate and aldarate metabolismD-glucarate catabolic processGlucarate dehydratase activityGlucarate dehydrataseGlucarate dehydratase [EC:4.2.1.40] 3.30.390.10 136 16 89 2.03 2.26
2og9A01 88.32 Toluene and xylene degradationPolaromonas sp. JS666Mandelate racemase [EC:5.1.2.2]Mandelate racemase/muconate lactonizing enzymeBenzoate degradation via hydroxylation 3.30.390.10 129 20 84 1.60 1.90
2oqhB01 87.51 Putative isomeraseStreptomyces coelicolor 3.30.390.10 129 24 86 3.83 4.42
3go2A01 87.23 Burkholderia xenovorans LB400Putative uncharacterized protein 3.30.390.10 114 20 81 1.71 2.10
2oqyA01 87.11 Muconate cycloisomeraseOceanobacillus iheyensis 3.30.390.10 142 20 84 2.26 2.67
2zadA01 87.10 Thermotoga maritimaL-Ala-D/L-Glu epimerase 3.30.390.10 109 19 81 1.62 1.99
2qjjA01 87.01 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain proteinStarvation sensing protein RspANovosphingobium aromaticivorans DSM 12444 3.30.390.10 140 21 79 1.57 1.98
2qq6B01 86.52 Rubrobacter xylanophilus DSM 9941Mandelate racemase/muconate lactonizing enzyme-like protein 3.30.390.10 115 28 77 1.92 2.47
2pgwA01 86.43 Sinorhizobium melilotiToluene and xylene degradationBenzoate degradation via hydroxylationMuconate cycloisomerase [EC:5.5.1.1]Mandelate racemase/muconate lactonizing enzyme family protein 3.30.390.10 147 21 82 1.76 2.12
2hzgB01 85.79 Rhodobacter sphaeroides 2.4.1Mandelate racemase/muconate lactonizing enzyme/Enolase superfamily 3.30.390.10 143 18 78 2.56 3.27
2qgyB01 84.65 3.30.390.10 135 20 88 2.90 3.26
1tzzB01 84.56 Bradyrhizobium japonicumBll6730 protein 3.30.390.10 119 13 73 2.31 3.13
2nqlA01 84.52 Agrobacterium tumefaciens str. C58Isomerase/lactonizing enzyme 3.30.390.10 162 24 77 2.28 2.93
1rvkA01 84.49 Agrobacterium tumefaciens str. C58Isomerase/lactonizing enzyme 3.30.390.10 115 23 78 2.50 3.19
1jpdX01 83.84 Racemase and epimerase activity, acting on amino acids and derivativesL-Ala-D/L-Glu epimeraseEscherichia coli K-12 3.30.390.10 99 24 73 2.12 2.87
2oz8A01 83.71 Mesorhizobium lotiMll7089 protein 3.30.390.10 128 15 85 2.93 3.41
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Displaying entries 1 to 22 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|3dgbA01
HASAIESIETIIVDLPTIRPHKLAMHTMQNQTLVLIRLRCADGIEGLGESTTIGGLAYGNESPDSIKTNIDRFVAPLLIG
QDASNINAAMLRLEQSIRGNTFAKSGIESALLDAQGKRLGLGLSLDEERLAFFR
BLAST against CATH

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Domain COMBS Sequence 

>pdb|3dgbA01
MSLHASAIESIETIIVDLPTIRPHKLAMHTMQNQTLVLIRLRCADGIEGLGESTTIGGLAYGNESPDSIKTNIDRFVAPL
LIGQDASNINAAMLRLEQSIRGNTFAKSGIESALLDAQGKRLGLGLSLDEERLAFFR
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 09 Mar 2009 14:55

Assigning to "3.30.390.10" based on similarity with "3ct2A01"

Flow stage update by auto on 09 Mar 2009 14:23

No in_process hits for Domain "3dgbA01" ready to be processed

Flow stage update by auto on 09 Mar 2009 14:23

NW result present for Domain "3dgbA01"

Flow stage update by auto on 08 Mar 2009 08:51

All required files are present for Domain "3dgbA01"

Flow stage update by auto on 07 Mar 2009 17:35

Beginning processing for Domain "3dgbA01"

Insertion by auto on 07 Mar 2009 17:11

Final ChopClose added based on similarity with "3ct2A"