CATH Domain: 3daqA00 XML data for domain: 3daqA00

Molscript image for 3daqA00
3daqA00
PDB coordinates for domain 3daqA00

PDB 3daq, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.20 Alpha-Beta Barrel
3.20.20 TIM Barrel
3.20.20.70 Aldolase class I Gene3D
3.20.20.70.10
3.20.20.70.10.1
3.20.20.70.10.1.1
3.20.20.70.10.1.1.1
3.20.20.70.10.1.1.1.1

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Segment boundaries for domain 3daqA00

Chopping figure for domain 3daqA00
DomainStart PDB ResidueStop PDB Residue
3daqA00 2 293

Structural Neighbourhood (16 entries)

There are 16 matching structural neighberhood comparisons for CATH ID 3.20.20.70.10.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 16 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2rfgA00 90.38 Dihydrodipicolinate synthase [EC:4.2.1.52]Dihydrodipicolinate synthaseHahella chejuensis KCTC 2396Lysine biosynthesisMetabolic pathways 3.20.20.70 278 34 94 1.53 1.61
3lerC00 90.32 Dihydrodipicolinate synthase [EC:4.2.1.52]Dihydrodipicolinate synthaseCampylobacter jejuniLysine biosynthesisMetabolic pathways 3.20.20.70 289 31 96 2.01 2.07
1xxxB00 89.76 Metabolic pathwaysLysine biosynthesisDihydrodipicolinate synthase [EC:4.2.1.52]Dihydrodipicolinate synthaseMycobacterium tuberculosis 3.20.20.70 295 32 96 1.48 1.54
2wkjA00 87.79 Amino sugar and nucleotide sugar metabolismN-acetylneuraminate lyase [EC:4.1.3.3]N-acetylneuraminate lyase activityN-acetylneuraminate catabolic processEscherichia coli K-12 3.20.20.70 297 23 96 1.95 2.02
3e96A00 87.31 Dihydrodipicolinate synthase [EC:4.2.1.52]Bacillus clausii KSM-K16Dihydrodipicolinate synthaseMetabolic pathwaysLysine biosynthesis 3.20.20.70 296 21 95 1.90 1.99
1w3iA00 87.12 2-keto-3-deoxy gluconate aldolaseSulfolobus solfataricus 3.20.20.70 293 22 94 2.01 2.13
2r8wA00 86.87 Dihydrodipicolinate synthase [EC:4.2.1.52]Agrobacterium tumefaciens str. C58Dihydrodipicolinate synthaseMetabolic pathwaysLysine biosynthesis 3.20.20.70 287 23 96 1.98 2.06
2hmcA00 83.78 Metabolic pathwaysLysine biosynthesisDihydrodipicolinate synthase [EC:4.2.1.52]Agrobacterium tumefaciens str. C58Dihydrodipicolinate synthase 3.20.20.70 303 21 91 2.49 2.72
1xi3A00 76.67 Pyrococcus furiosusThiamine metabolismThiamine-phosphate pyrophosphorylaseThiamine-phosphate pyrophosphorylase [EC:2.5.1.3]Metabolic pathways 3.20.20.70 202 14 61 2.84 4.59
3f4wA00 75.90 Pentose and glucuronate interconversionsMethane metabolismPutative hexulose 6 phosphate synthaseSalmonella enterica subsp. enterica serovar Typhimurium3-hexulose-6-phosphate synthase [EC:4.1.2.43] 3.20.20.70 211 14 65 2.70 4.15
2tpsB00 75.52 Thiamine metabolismBacillus subtilisThiamine-phosphate pyrophosphorylaseThiamine-phosphate pyrophosphorylase [EC:2.5.1.3]Metabolic pathways 3.20.20.70 226 11 63 2.94 4.62
1wa3D00 75.08 Thermotoga maritimaArginine and proline metabolism2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.16]Glyoxylate and dicarboxylate metabolism 3.20.20.70 203 16 61 2.68 4.33
1q6oB00 74.89 Ascorbate and aldarate metabolism3-keto-L-gulonate-6-phosphate decarboxylase ulaDMagnesium ion binding3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]3-dehydro-L-gulonate-6-phosphate decarboxylase activity 3.20.20.70 215 12 66 3.07 4.62
1wbhB00 74.72 Arginine and proline metabolismGlyoxylate and dicarboxylate metabolismMetabolic pathwaysPentose and glucuronate interconversionsPentose phosphate pathway 3.20.20.70 214 9 60 2.64 4.36
1vhcF00 73.08 Arginine and proline metabolism2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.16]Glyoxylate and dicarboxylate metabolismMetabolic pathwaysHaemophilus influenzae 3.20.20.70 209 10 58 2.80 4.76
2yw3E00 72.31 Arginine and proline metabolism2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.16]Glyoxylate and dicarboxylate metabolismMetabolic pathwaysThermus thermophilus HB8 3.20.20.70 198 16 57 2.74 4.74
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Displaying entries 1 to 16 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|3daqA00
THLFEGVGVALTTPFTNNKVNLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGT
NDTEKSIQASIQAKALGADAIMLITPYYNKTNQRGLVKHFEAIADAVKLPVVLYNVPSRTNMTIEPETVEILSQHPYIVA
LKDATNDFEYLEEVKKRIDTNSFALYSGNDDNVVEYYQRGGQGVISVIANVIPKEFQALYDAQQSGLDIQDQFKPIGTLL
SALSVDINPIPIKALTSYLGFGNYELRLPLVSLEDTDTKVLREAYDTFKAGE
BLAST against CATH

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Domain COMBS Sequence 

>pdb|3daqA00
THLFEGVGVALTTPFTNNKVNLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGT
NDTEKSIQASIQAKALGADAIMLITPYYNKTNQRGLVKHFEAIADAVKLPVVLYNVPSRTNMTIEPETVEILSQHPYIVA
LKDATNDFEYLEEVKKRIDTNSFALYSGNDDNVVEYYQRGGQGVISVIANVIPKEFQALYDAQQSGLDIQDQFKPIGTLL
SALSVDINPIPIKALTSYLGFGNYELRLPLVSLEDTDTKVLREAYDTFKAGE
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 09 Aug 2008 23:21

Assigning to "3.20.20.70" based on similarity with "2yxgA00"

Flow stage update by auto on 09 Aug 2008 23:07

No in_process hits for Domain "3daqA00" ready to be processed

Flow stage update by auto on 09 Aug 2008 23:07

NW result present for Domain "3daqA00"

Flow stage update by auto on 09 Aug 2008 06:38

All required files are present for Domain "3daqA00"

Flow stage update by auto on 08 Aug 2008 20:55

Beginning processing for Domain "3daqA00"

Insertion by auto on 08 Aug 2008 20:10

Final ChopClose added based on similarity with "2yxgA"