CATH Domain: 3cr5X00 XML data for domain: 3cr5X00

Molscript image for 3cr5X00
3cr5X00
PDB coordinates for domain 3cr5X00

PDB 3cr5, Chain X, Domain 0

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.238 Recoverin; domain 1
1.10.238.10 EF-hand Gene3D
1.10.238.10.5
1.10.238.10.5.1
1.10.238.10.5.1.1
1.10.238.10.5.1.1.3
1.10.238.10.5.1.1.3.3

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Segment boundaries for domain 3cr5X00

Chopping figure for domain 3cr5X00
DomainStart PDB ResidueStop PDB Residue
3cr5X00 0 90

Structural Neighbourhood (23 entries)

There are 23 matching structural neighberhood comparisons for CATH ID 1.10.238.10.5.1.1.3.3 (SIMAX score < 5)

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Displaying entries 1 to 23 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3c1vA00 92.05 Calcium ion bindingNucleusRAGE receptor bindingEpithelial to mesenchymal transitionPositive regulation of I-kappaB kinase/NF-kappaB cascade 1.10.238.10 87 42 95 1.66 1.74
1xk4E00 91.19 Protein S100-A8Calcium ion bindingHomo sapiensInflammatory responseProtein binding 1.10.238.10 89 31 94 1.96 2.08
1a4pA00 89.74 Protein S100-A10Homo sapiens 1.10.238.10 92 36 91 2.28 2.50
1qx2A00 87.78 Protein S100-GBos taurus 1.10.238.10 75 28 83 3.18 3.79
1topA02 86.52 Gallus gallusTroponin C, skeletal muscle 1.10.238.10 87 18 83 2.68 3.19
1ggzA01 85.48 Calcium ion bindingOlfactory transductionCalcium signaling pathwayPhosphatidylinositol signaling systemInsulin signaling pathway 1.10.238.10 76 19 83 3.43 4.09
1wrkA00 85.47 Cardiac muscle contractionCalcium signaling pathwayDilated cardiomyopathyHypertrophic cardiomyopathy (HCM)Calcium ion binding 1.10.238.10 82 15 85 3.23 3.80
1g33A00 84.97 Rattus norvegicusParvalbumin alpha 1.10.238.10 73 24 82 3.36 4.06
2f3yA02 84.67 Phosphatidylinositol signaling systemCalcium signaling pathwayOocyte meiosisMelanogenesisInsulin signaling pathway 1.10.238.10 68 20 75 2.72 3.59
1exrA02 84.48 Phosphatidylinositol signaling systemCalmodulinParamecium tetraureliaCalmodulin 1.10.238.10 67 23 74 2.71 3.63
1qtxA02 84.25 1.10.238.10 68 20 75 2.72 3.59
1g4yR01 83.59 Calcium signaling pathwayPhosphatidylinositol signaling systemInsulin signaling pathwayOocyte meiosisGnRH signaling pathway 1.10.238.10 80 17 88 3.83 4.33
1dtlA02 83.26 Cardiac muscle contractionCalcium signaling pathwayTroponin C, slow skeletal and cardiac musclesGallus gallusTroponin C, slow skeletal and cardiac muscles 1.10.238.10 63 23 71 3.20 4.49
1tizA00 81.84 Calcium-binding protein CMLArabidopsis thalianaPlant-pathogen interactionProbable calcium-binding protein CML34 1.10.238.10 66 22 73 2.57 3.49
1exrA01 81.54 Phosphatidylinositol signaling systemCalmodulinParamecium tetraureliaCalmodulin 1.10.238.10 76 17 81 3.76 4.61
1eg3A04 81.21 Cell surfaceCostamereCytoskeletonDystrophin-associated glycoprotein complexActin binding 1.10.238.10 82 10 81 3.43 4.20
1jfjA01 80.35 Entamoeba histolyticaCalcium-binding protein 1.10.238.10 63 20 70 2.73 3.89
1wdcB01 80.22 Myosin regulatory light chain, striated adductor muscleArgopecten irradians 1.10.238.10 70 7 77 3.68 4.78
1uurA03 78.44 Protein homodimerization activityNucleusSignal transducer and activator of transcription APositive regulation of transcriptionCytosol 1.10.238.10 88 4 84 3.95 4.70
2bl0B01 78.24 Physarum polycephalumMyosin regulatory light chain 1.10.238.10 68 13 77 3.80 4.93
1ij5A03 77.09 Physarum polycephalumPlasmodial-specific protein LAV1-2 1.10.238.10 130 13 53 2.61 4.92
1k90E01 76.31 Phosphatidylinositol signaling systemCalcium signaling pathwayOocyte meiosisMelanogenesisInsulin signaling pathway 1.10.238.10 74 18 82 3.27 3.95
1s26D01 74.90 Calcium signaling pathwayPhosphatidylinositol signaling systemOocyte meiosisMelanogenesisInsulin signaling pathway 1.10.238.10 59 20 65 2.79 4.26
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Displaying entries 1 to 23 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|3cr5X00
MSELEKAVVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAM
ITTACHEFFEH
BLAST against CATH

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Domain COMBS Sequence 

>pdb|3cr5X00
MSELEKAVVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAM
ITTACHEFFEHE
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 31 Jul 2008 03:49

Assigning to "1.10.238.10" based on similarity with "1cfpA00"

Flow stage update by auto on 31 Jul 2008 03:10

No in_process hits for Domain "3cr5X00" ready to be processed

Flow stage update by auto on 31 Jul 2008 03:10

NW result present for Domain "3cr5X00"

Flow stage update by auto on 26 Jul 2008 11:50

All required files are present for Domain "3cr5X00"

Flow stage update by auto on 25 Jul 2008 19:45

Beginning processing for Domain "3cr5X00"

Insertion by auto on 25 Jul 2008 17:48

Final ChopClose added based on similarity with "1cfpA"