Domain assigned by cuff on 01 Apr 2009 17:10
homology match
| CATH Code | Level Description | Links |
|---|---|---|
3
| Alpha Beta | |
3.10
| Roll | |
3.10.450
| Nuclear Transport Factor 2; Chain: A, | |
3.10.450.50
| Gene3D | |
3.10.450.50.19
| ||
3.10.450.50.19.1
| ||
3.10.450.50.19.1.1
| ||
3.10.450.50.19.1.1.1
| ||
3.10.450.50.19.1.1.1.1
|
There are 12 matching structural neighberhood comparisons for CATH ID 3.10.450.50.19.1.1.1.1 (SIMAX score < 5)
>pdb|3cnxA00 TPDTDVEQVGLANTAFYEAERGDFETLSSLWLTPADLGVPADAGVVSCVHPGWPVLSGRGEVLRSYALIANTEYIQFFLT DVHVSVTGDTALVTCTENILSGGGPLVGQLVVATNVFRRTPDGWKLWSHHASPVLA
homology match
homology match
User 'cuff' has allocated a domain to themselves for HomChecking with comment : Grabbed this domain via HomCheck's "Get Me A Domain" button.
User 'cuff' has allocated a domain to themselves for HomChecking with comment : Grabbed this domain via HomCheck's "Get Me A Domain" button.
Domain "3cnxA00" SCOP scan with no results - no SCOP mapping
Adding scan of type "DOMAIN_SCAN_SCOP_CATH" with 0 results for 3cnxA00
Retrieved PRC_PFAMCATH results for job ID SID3726459766474320 and results inserted.
Adding scan of type "DOMAIN_SCAN_PRC_PFAMCATH" with 65 results for 3cnxA00
PRC_PFAMCATH job SID3726459766474320 is not yet finished.
The entry "3cnxA00" has been submitted to the PRC_PFAMCATH webservice.
The entry "3cnxA00" has been submitted to the PRC_PFAMCATH webservice.
Retrieved SSAP results for job ID SID4359613716874152 and results inserted.
Adding scan of type "DOMAIN_SCAN_SSAP_CATH" with 1853 results for 3cnxA00
SSAP job SID4359613716874152 is not yet finished.
The entry "3cnxA00" has been submitted to the SSAP webservice.
The entry "3cnxA00" has been submitted to the SSAP webservice.
Retrieved PRC results for job ID SID2881507027634748 and inserted them into the database.
Adding scan of type "DOMAIN_SCAN_PRC_CATH" with 18 results for 3cnxA00
The entry "3cnxA00" has been submitted to the PRC webservice.
The entry "3cnxA00" has been submitted to the PRC webservice.
Retrieved HMM(SAM) results for job ID SID6321168992542053 and inserted them into the database.
Adding scan of type "DOMAIN_SCAN_SAM_CATH" with 6 results for 3cnxA00
HMM(SAM) job SID6321168992542053 is not yet finished.
The entry "3cnxA00" has been submitted to the HMM (SAM) webservice.
The entry "3cnxA00" has been submitted to the HMM (SAM) webservice.
Unable to retrieve "3cnxA00" HMM(SAM) results for job "SID4989152054954784"
HMM(SAM) job SID4989152054954784 is not yet finished.
The entry "3cnxA00" has been submitted to the HMM (SAM) webservice.
The entry "3cnxA00" has been submitted to the HMM (SAM) webservice.
Unable to retrieve "3cnxA00" HMM(SAM) results for job "SID8403089979241728"
HMM(SAM) job SID8403089979241728 is not yet finished.
The entry "3cnxA00" has been submitted to the HMM (SAM) webservice.
The entry "3cnxA00" has been submitted to the HMM (SAM) webservice.
Retrieved "3cnxA00" CATHEDRAL results for job ID SID8128795587468224 and inserted them into the database.
Adding scan of type "DOMAIN_SCAN_CATHEDRAL_CATH" with 49 results for 3cnxA00
"3cnxA00" CATHEDRAL job SID8128795587468224 is not yet finished.
The entry "3cnxA00" has been submitted to the CATHEDRAL webservice.
The entry "3cnxA00" has been submitted to the CATHEDRAL webservice.
Unable to retrieve "3cnxA00" CATHEDRAL results for job "SID8748664577529701"
The entry "3cnxA00" has been submitted to the CATHEDRAL webservice.
The entry "3cnxA00" has been submitted to the CATHEDRAL webservice.
Unable to retrieve "3cnxA00" CATHEDRAL results for job "SID8805365905000864"
The entry "3cnxA00" has been submitted to the CATHEDRAL webservice.
The entry "3cnxA00" has been submitted to the CATHEDRAL webservice.
Unable to retrieve "3cnxA00" CATHEDRAL results for job "SID6645178303234312"
The entry "3cnxA00" has been submitted to the CATHEDRAL webservice.
The entry "3cnxA00" has been submitted to the CATHEDRAL webservice.
Unable to retrieve "3cnxA00" CATHEDRAL results for job "SID6935239019848436"
"3cnxA00" CATHEDRAL job SID6935239019848436 is not yet finished.
The entry "3cnxA00" has been submitted to the CATHEDRAL webservice.
The entry "3cnxA00" has been submitted to the CATHEDRAL webservice.
ScanList with 12545 domains written to "/cath/data/current/scanlists/cathdb_current.fletcher/3cnxA00.scanlist" for "3cnxA00"
Writing ScanList containing 12545 domains to file "/cath/data/current/scanlists/cathdb_current.fletcher/3cnxA00.scanlist" for domain "3cnxA00"
No satisfactory AssignClose result found.
No in_process hits for Domain "3cnxA00" ready to be processed
NW result present for Domain "3cnxA00"
All required files are present for Domain "3cnxA00"
Beginning processing for Domain "3cnxA00"
nice chopping