CATH Domain: 3ckyA01 XML data for domain: 3ckyA01

Molscript image for 3ckyA01
3ckyA01
PDB coordinates for domain 3ckyA01

PDB 3cky, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.720 NAD(P)-binding Rossmann-like Domain Gene3D
3.40.50.720.159
3.40.50.720.159.1
3.40.50.720.159.1.1
3.40.50.720.159.1.1.1
3.40.50.720.159.1.1.1.1

Segment boundaries for domain 3ckyA01

Chopping figure for domain 3ckyA01
DomainStart PDB ResidueStop PDB Residue
3ckyA01 4 166
3ckyA02 167 300

Structural Neighbourhood (18 entries)

There are 18 matching structural neighberhood comparisons for CATH ID 3.40.50.720.159.1.1.1.1 (SIMAX score < 5)

Displaying entries 1 to 18 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2rcyA01 84.22 Arginine and proline metabolismMetabolic pathwaysPlasmodium falciparum 3D7Pyrroline carboxylate reductasePyrroline-5-carboxylate reductase [EC:1.5.1.2] 3.40.50.720 148 14 84 2.25 2.68
2amfA01 83.73 Arginine and proline metabolismMetabolic pathwaysPutative pyrroline carboxylate reductasePyrroline-5-carboxylate reductase [EC:1.5.1.2]Streptococcus pyogenes serotype M1 3.40.50.720 148 13 85 2.31 2.69
1pl8A02 78.34 Membrane fractionZinc ion bindingL-iditol 2-dehydrogenase [EC:1.1.1.14]Sorbitol catabolic processGlucose metabolic process 3.40.50.720 139 14 68 3.02 4.43
1f8fA02 78.20 Acinetobacter calcoaceticusBenzyl alcohol dehydrogenase 3.40.50.720 137 10 68 3.20 4.66
1lluA02 78.19 Tyrosine metabolismFatty acid metabolism1- and 2-Methylnaphthalene degradationMetabolic pathwaysMetabolism of xenobiotics by cytochrome P450 3.40.50.720 138 10 68 3.15 4.63
1o6zA02 78.07 Malate dehydrogenase [EC:1.1.1.37]Citrate cycle (TCA cycle)Pyruvate metabolismHaloarcula marismortuiMetabolic pathways 3.40.50.720 142 11 68 2.60 3.82
1xeaA01 77.83 Vibrio choleraeOxidoreductase, Gfo/Idh/MocA familyVirulence factor 3.40.50.720 117 12 67 2.51 3.72
2i76A01 77.68 Thermotoga maritimaPutative uncharacterized protein 3.40.50.720 142 13 85 3.05 3.58
1hyhA01 77.42 Weissella confusaL-2-hydroxyisocaproate dehydrogenase 3.40.50.720 141 17 71 2.84 3.96
1ydwA01 77.09 Arabidopsis thalianaUncharacterized oxidoreductase At4g09670 3.40.50.720 124 11 69 2.86 4.09
2eggA02 76.87 Shikimate 5-dehydrogenase [EC:1.1.1.25]Geobacillus kaustophilusPhenylalanine, tyrosine and tryptophan biosynthesisShikimate 5-dehydrogenaseMetabolic pathways 3.40.50.720 140 12 66 2.53 3.78
2aefA01 76.57 Methanothermobacter thermautotrophicus str. Delta HCalcium-gated potassium channel mthK 3.40.50.720 115 12 65 2.99 4.55
3ff4A00 76.33 Cytophaga hutchinsonii ATCC 33406Putative uncharacterized protein 3.40.50.720 119 11 69 3.25 4.65
2ho3A01 76.22 Oxidoreductase, Gfo/Idh/MocA familyStreptococcus pneumoniae 3.40.50.720 113 15 65 2.91 4.47
1vi2A02 75.99 Phenylalanine, tyrosine and tryptophan biosynthesisMetabolic pathwaysQuinate/shikimate dehydrogenaseQuinate/shikimate dehydrogenase [EC:1.1.1.282]Shikimate 5-dehydrogenase activity 3.40.50.720 147 10 68 2.80 4.11
3a06B01 75.46 Terpenoid backbone biosynthesisThermotoga maritima1-deoxy-D-xylulose 5-phosphate reductoisomerase1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]Metabolic pathways 3.40.50.720 141 9 68 2.86 4.16
1p3dA01 74.57 D-Glutamine and D-glutamate metabolismUDP-N-acetylmuramate--L-alanine ligaseUDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]Haemophilus influenzaePeptidoglycan biosynthesis 3.40.50.720 87 17 52 2.53 4.85
1j6uA01 73.68 D-Glutamine and D-glutamate metabolismThermotoga maritimaUDP-N-acetylmuramate--L-alanine ligaseUDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]Peptidoglycan biosynthesis 3.40.50.720 85 17 50 2.49 4.89
Displaying entries 1 to 18 (page 1 of 1)


Domain ATOM Sequence

>pdb|3ckyA01
SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQACENNQKVAAASDIIFTSLPNAGIVETVMNGPGG
VLSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGIDYVDAPVSGGTKGAEAGTLTIMVGASEAVFEKIQPVLSVIGKDIYH
VGD    

Domain COMBS Sequence

>pdb|3ckyA01
MEKSIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQACENNQKVAAASDIIFTSLPNAGIVETVMNG
PGGVLSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGIDYVDAPVSGGTKGAEAGTLTIMVGASEAVFEKIQPVLSVIGKD
IYHVGD    

Domain History Events (6)

Domain assigned by auto on 30 Aug 2008 17:26

Assigning to "3.40.50.720" based on similarity with "2h78A01"

Flow stage update by auto on 30 Aug 2008 17:08

No in_process hits for Domain "3ckyA01" ready to be processed

Flow stage update by auto on 30 Aug 2008 17:08

NW result present for Domain "3ckyA01"

Flow stage update by auto on 30 Aug 2008 08:14

All required files are present for Domain "3ckyA01"

Flow stage update by auto on 29 Aug 2008 08:47

Beginning processing for Domain "3ckyA01"

Insertion by auto on 29 Aug 2008 08:42

Final ChopClose added based on similarity with "2h78A"