CATH Domain: 3ce7A00 XML data for domain: 3ce7A00

Molscript image for 3ce7A00
3ce7A00
PDB coordinates for domain 3ce7A00

PDB 3ce7, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.1200 Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A
1.10.1200.10 Gene3D
1.10.1200.10.2
1.10.1200.10.2.1
1.10.1200.10.2.1.1
1.10.1200.10.2.1.1.1
1.10.1200.10.2.1.1.1.1

[top]
Segment boundaries for domain 3ce7A00

Chopping figure for domain 3ce7A00
DomainStart PDB ResidueStop PDB Residue
3ce7A00 12 101

Structural Neighbourhood (6 entries)

There are 6 matching structural neighberhood comparisons for CATH ID 1.10.1200.10.2.1.1.1.1 (SIMAX score < 5)

[1]
Displaying entries 1 to 6 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2avaA00 85.43 Spinacia oleraceaAcyl carrier protein 1, chloroplastic 1.10.1200.10 82 24 91 3.50 3.82
1dv5A00 83.42 D-Alanine metabolismD-alanine--poly(phosphoribitol) ligase subunit 2D-alanine-poly(phosphoribitol) ligase [EC:6.1.1.13]Lactobacillus rhamnosus 1.10.1200.10 80 17 84 2.74 3.24
1or5A00 83.11 Streptomyces roseofulvusAcyl carrier protein 1.10.1200.10 82 12 89 2.84 3.18
2cnrA00 83.01 Acyl carrier proteinAcyl carrier proteinStreptomyces coelicolor 1.10.1200.10 82 17 90 2.94 3.25
1l8qA02 75.82 Two-component systemChromosomal replication initiator proteinChromosomal replication initiator protein dnaAAquifex aeolicus 1.10.8.60 49 14 51 2.37 4.63
1qx2A00 70.72 Protein S100-GBos taurus 1.10.238.10 75 8 70 3.50 4.98
[1]
Displaying entries 1 to 6 (page 1 of 1)


[top]
Domain ATOM Sequence 

>pdb|3ce7A00
VVDTDINAVTNYIVGMCQKFLQKGEKVTPSSKLEELRTREDRLWDCLDTVEFVLDVEEIFDVTVPDEVADNFQTLQEIAD
FVVSERAKAG
BLAST against CATH

[top]
Domain COMBS Sequence 

>pdb|3ce7A00
GANETTKQESPVVDTDINAVTNYIVGMCQKFLQKGEKVTPSSKLEELRTREDRLWDCLDTVEFVLDVEEIFDVTVPDEVA
DNFQTLQEIADFVVSERAKAGKFMKDQ
BLAST against CATH

[top]
Domain History Events (59)

Domain assigned by cuff on 30 Mar 2009 18:55

homology match

Domain assignment manual match h by cuff on 30 Mar 2009 18:54

same superfamily

Homcheck allotment by cuff on 30 Mar 2009 18:50

User 'cuff' has allocated a domain to themselves for HomChecking with comment : Grabbed this domain via HomCheck's "Get Me A Domain" button.

Flow stage update by cuff on 30 Mar 2009 18:50

User 'cuff' has allocated a domain to themselves for HomChecking with comment : Grabbed this domain via HomCheck's "Get Me A Domain" button.

Flow stage update by auto on 19 Mar 2009 18:51

Domain "3ce7A00" SCOP scan with no results - no SCOP mapping

Domain scan scop cath by auto on 19 Mar 2009 18:51

Adding scan of type "DOMAIN_SCAN_SCOP_CATH" with 0 results for 3ce7A00

Flow stage update by auto on 19 Mar 2009 16:09

Retrieved PRC_PFAMCATH results for job ID SID4904678160301856 and results inserted.

Domain scan prc pfamcath by auto on 19 Mar 2009 16:08

Adding scan of type "DOMAIN_SCAN_PRC_PFAMCATH" with 18 results for 3ce7A00

Update comment by auto on 07 Mar 2009 16:32

PRC_PFAMCATH job SID4904678160301856 is not yet finished.

Prc pfamcath submit by auto on 07 Mar 2009 16:18

The entry "3ce7A00" has been submitted to the PRC_PFAMCATH webservice.

Flow stage update by auto on 07 Mar 2009 16:18

The entry "3ce7A00" has been submitted to the PRC_PFAMCATH webservice.

Flow stage update by auto on 07 Mar 2009 16:10

Retrieved SSAP results for job ID SID1245872145271728 and results inserted.

Domain scan ssap cath by auto on 07 Mar 2009 16:07

Adding scan of type "DOMAIN_SCAN_SSAP_CATH" with 3173 results for 3ce7A00

Update comment by auto on 04 Mar 2009 09:21

SSAP job SID1245872145271728 is not yet finished.

Ssap cath submit by auto on 04 Mar 2009 09:03

The entry "3ce7A00" has been submitted to the SSAP webservice.

Flow stage update by auto on 04 Mar 2009 09:03

The entry "3ce7A00" has been submitted to the SSAP webservice.

Flow stage update by auto on 04 Mar 2009 08:06

Retrieved PRC results for job ID SID2186826477690562 and inserted them into the database.

Domain scan prc cath by auto on 04 Mar 2009 08:05

Adding scan of type "DOMAIN_SCAN_PRC_CATH" with 19 results for 3ce7A00

Prc cath submit by auto on 04 Mar 2009 06:22

The entry "3ce7A00" has been submitted to the PRC webservice.

Flow stage update by auto on 04 Mar 2009 06:22

The entry "3ce7A00" has been submitted to the PRC webservice.

Flow stage update by auto on 04 Mar 2009 05:14

Retrieved HMM(SAM) results for job ID SID0329172026299232 and inserted them into the database.

Domain scan sam cath by auto on 04 Mar 2009 05:14

Adding scan of type "DOMAIN_SCAN_SAM_CATH" with 12 results for 3ce7A00

Update comment by auto on 04 Mar 2009 01:16

HMM(SAM) job SID0329172026299232 is not yet finished.

Flow stage update by auto on 03 Mar 2009 23:49

The entry "3ce7A00" has been submitted to the HMM (SAM) webservice.

Sam cath submit by auto on 03 Mar 2009 23:49

The entry "3ce7A00" has been submitted to the HMM (SAM) webservice.

Flow stage update by auto on 19 Feb 2009 16:08

Unable to retrieve "3ce7A00" HMM(SAM) results for job "SID1429804309533672"

Update comment by auto on 19 Feb 2009 08:42

HMM(SAM) job SID1429804309533672 is not yet finished.

Sam cath submit by auto on 19 Feb 2009 08:16

The entry "3ce7A00" has been submitted to the HMM (SAM) webservice.

Flow stage update by auto on 19 Feb 2009 08:16

The entry "3ce7A00" has been submitted to the HMM (SAM) webservice.

Flow stage update by auto on 27 Jan 2009 12:24

Unable to retrieve "3ce7A00" HMM(SAM) results for job "SID0147098826057816"

Update comment by auto on 22 Jan 2009 17:52

HMM(SAM) job SID0147098826057816 is not yet finished.

Sam cath submit by auto on 22 Jan 2009 17:36

The entry "3ce7A00" has been submitted to the HMM (SAM) webservice.

Flow stage update by auto on 22 Jan 2009 17:36

The entry "3ce7A00" has been submitted to the HMM (SAM) webservice.

Flow stage update by auto on 03 Dec 2008 15:09

Unable to retrieve "3ce7A00" HMM(SAM) results for job "SID3913356323575712"

Update comment by auto on 03 Dec 2008 11:09

HMM(SAM) job SID3913356323575712 is not yet finished.

Flow stage update by auto on 03 Dec 2008 10:58

The entry "3ce7A00" has been submitted to the HMM (SAM) webservice.

Sam cath submit by auto on 03 Dec 2008 10:58

The entry "3ce7A00" has been submitted to the HMM (SAM) webservice.

Flow stage update by auto on 03 Dec 2008 10:20

Retrieved "3ce7A00" CATHEDRAL results for job ID SID4707831487622600 and inserted them into the database.

Domain scan cathedral cath by auto on 03 Dec 2008 10:20

Adding scan of type "DOMAIN_SCAN_CATHEDRAL_CATH" with 88 results for 3ce7A00

Update comment by auto on 03 Dec 2008 01:01

"3ce7A00" CATHEDRAL job SID4707831487622600 is not yet finished.

Flow stage update by auto on 03 Dec 2008 00:27

The entry "3ce7A00" has been submitted to the CATHEDRAL webservice.

Cathedral cath submit by auto on 03 Dec 2008 00:27

The entry "3ce7A00" has been submitted to the CATHEDRAL webservice.

Flow stage update by auto on 02 Dec 2008 23:53

ScanList with 12545 domains written to "/cath/data/current/scanlists/cathdb_current.fletcher/3ce7A00.scanlist" for "3ce7A00"

Write scan list by auto on 02 Dec 2008 23:53

Writing ScanList containing 12545 domains to file "/cath/data/current/scanlists/cathdb_current.fletcher/3ce7A00.scanlist" for domain "3ce7A00"

Update comment by auto on 02 Dec 2008 21:06

Waiting for 36 new domains (example : 3cmbB00) to be processed so that they can be scanned against too.

Update comment by auto on 02 Dec 2008 17:28

Waiting for 87 new domains (example : 3cjhE00) to be processed so that they can be scanned against too.

Update comment by auto on 02 Dec 2008 15:14

Waiting for 147 new domains (example : 2r6gF01) to be processed so that they can be scanned against too.

Update comment by auto on 02 Dec 2008 11:26

Waiting for 204 new domains (example : 2j7aI00) to be processed so that they can be scanned against too.

Update comment by auto on 02 Dec 2008 10:46

Waiting for 279 new domains (example : 2ar0A01) to be processed so that they can be scanned against too.

Update comment by auto on 01 Dec 2008 23:28

Waiting for 310 new domains (example : 2ar0A01) to be processed so that they can be scanned against too.

Update comment by auto on 01 Dec 2008 21:05

Waiting for 358 new domains (example : 2ar0A01) to be processed so that they can be scanned against too.

Update comment by auto on 01 Dec 2008 18:09

Waiting for 396 new domains (example : 2ar0A01) to be processed so that they can be scanned against too.

Update comment by auto on 01 Dec 2008 14:31

Waiting for 256 new domains (example : 3cfuB00) to be processed so that they can be scanned against too.

Flow stage update by auto on 01 Dec 2008 14:30

No satisfactory AssignClose result found.

Flow stage update by auto on 01 Dec 2008 14:09

No in_process hits for Domain "3ce7A00" ready to be processed

Flow stage update by auto on 01 Dec 2008 14:09

NW result present for Domain "3ce7A00"

Flow stage update by auto on 28 Nov 2008 11:14

All required files are present for Domain "3ce7A00"

Flow stage update by auto on 27 Nov 2008 20:08

Beginning processing for Domain "3ce7A00"

Insertion by cuff on 27 Nov 2008 16:55

nice chopping