CATH Domain: 3cbtA01 XML data for domain: 3cbtA01

Molscript image for 3cbtA01
3cbtA01
PDB coordinates for domain 3cbtA01

PDB 3cbt, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.40 Beta Barrel
2.40.380 FomD barrel-like fold
2.40.380.10 FomD barrel-like domain Gene3D
2.40.380.10.1
2.40.380.10.1.1
2.40.380.10.1.1.1
2.40.380.10.1.1.1.2
2.40.380.10.1.1.1.2.1

Segment boundaries for domain 3cbtA01

Chopping figure for domain 3cbtA01
DomainStart PDB ResidueStop PDB Residue
3cbtA01 23 217

Structural Neighbourhood (0 entries)

Sorry, we could not find any non-redundant representatives with similar structural scores to this domain in CATH.


Domain ATOM Sequence

>pdb|3cbtA01
GHWAPGSHILWRYRENGGPHVHIARPVTVVRDDADLLAVWLAPGTECVKPVLADGTPVHLEPLATRYTKPRTVQRDQWFG
TGVLKLARPGEAWSVWLFWDPGWRFKNWYVNLERPLTRWEGGVDSEDHFLDISVHPDRTWHWRDEDEFAQALRDGLDPAS
AGRVRRAGRSAVAEIRAWGSPFADGWEHWRPDPA    

Domain COMBS Sequence

>pdb|3cbtA01
GHWAPGSHILWRYRENGGPHVHIARPVTVVRDDADLLAVWLAPGTECVKPVLADGTPVHLEPLATRYTKPRTVQRDQWFG
TGVLKLARPGEAWSVWLFWDPGWRFKNWYVNLERPLTRWEGGVDSEDHFLDISVHPDRTWHWRDEDEFAQALRDGLXDPA
SAGRVRRAGRSAVAEIRAWGSPFADGWEHWRPDPA    

Domain History Events (46)

Domain assigned by cuff on 13 Oct 2008 15:33

same homology

Domain assignment manual match h by yan on 11 Aug 2008 14:31

good scores and superposition, predicted protein from a fosfomycin biosynthesis gene cluster in Streptomyces wedmorensis according to pfam, 17% sequence identity.

Homcheck review by yan on 11 Aug 2008 14:31

good scores and superposition, predicted protein from a fosfomycin biosynthesis gene cluster in Streptomyces wedmorensis according to pfam, 17% sequence identity.

Flow stage update by yan on 11 Aug 2008 14:31

good scores and superposition, predicted protein from a fosfomycin biosynthesis gene cluster in Streptomyces wedmorensis according to pfam, 17% sequence identity.

Homcheck allotment by yan on 11 Aug 2008 14:25

User 'yan' has allocated a domain to themselves for HomChecking with comment : Grabbed this domain via HomCheck's "Get Me A Domain" button.

Flow stage update by yan on 11 Aug 2008 14:25

User 'yan' has allocated a domain to themselves for HomChecking with comment : Grabbed this domain via HomCheck's "Get Me A Domain" button.

Flow stage update by auto on 10 Aug 2008 15:43

Domain "3cbtA01" SCOP scan with no results - no SCOP mapping

Domain scan scop cath by auto on 10 Aug 2008 15:40

Adding scan of type "DOMAIN_SCAN_SCOP_CATH" with 0 results for 3cbtA01

Flow stage update by auto on 10 Aug 2008 15:34

Retrieved PRC_PFAMCATH results for job ID SID2227818386221728 and results inserted.

Domain scan prc pfamcath by auto on 10 Aug 2008 15:34

Adding scan of type "DOMAIN_SCAN_PRC_PFAMCATH" with 1 results for 3cbtA01

Update comment by auto on 09 Aug 2008 07:08

PRC_PFAMCATH job SID2227818386221728 is not yet finished.

Prc pfamcath submit by auto on 09 Aug 2008 07:08

The entry "3cbtA01" has been submitted to the PRC_PFAMCATH webservice.

Flow stage update by auto on 09 Aug 2008 07:08

The entry "3cbtA01" has been submitted to the PRC_PFAMCATH webservice.

Flow stage update by auto on 09 Aug 2008 07:05

Retrieved SSAP results for job ID SID5808379891332352 and results inserted.

Domain scan ssap cath by auto on 09 Aug 2008 07:04

Adding scan of type "DOMAIN_SCAN_SSAP_CATH" with 191 results for 3cbtA01

Update comment by auto on 07 Aug 2008 11:47

SSAP job SID5808379891332352 is not yet finished.

Ssap cath submit by auto on 07 Aug 2008 11:46

The entry "3cbtA01" has been submitted to the SSAP webservice.

Flow stage update by auto on 07 Aug 2008 11:46

The entry "3cbtA01" has been submitted to the SSAP webservice.

Flow stage update by auto on 07 Aug 2008 11:45

Retrieved PRC results for job ID SID5318434310545568 and inserted them into the database.

Domain scan prc cath by auto on 07 Aug 2008 11:44

Adding scan of type "DOMAIN_SCAN_PRC_CATH" with 2 results for 3cbtA01

Update comment by auto on 07 Aug 2008 08:57

PRC job SID5318434310545568 is not yet finished.

Prc cath submit by auto on 07 Aug 2008 08:55

The entry "3cbtA01" has been submitted to the PRC webservice.

Flow stage update by auto on 07 Aug 2008 08:55

The entry "3cbtA01" has been submitted to the PRC webservice.

Flow stage update by auto on 07 Aug 2008 08:50

Retrieved HMM(SAM) results for job ID SID9566618243731864 and inserted them into the database.

Domain scan sam cath by auto on 07 Aug 2008 08:50

Adding scan of type "DOMAIN_SCAN_SAM_CATH" with 2 results for 3cbtA01

Update comment by auto on 07 Aug 2008 03:55

HMM(SAM) job SID9566618243731864 is not yet finished.

Flow stage update by auto on 07 Aug 2008 03:52

The entry "3cbtA01" has been submitted to the HMM (SAM) webservice.

Sam cath submit by auto on 07 Aug 2008 03:52

The entry "3cbtA01" has been submitted to the HMM (SAM) webservice.

Flow stage update by auto on 07 Aug 2008 00:17

Unable to retrieve "3cbtA01" HMM(SAM) results for job "SID0250881609279764"

Update comment by auto on 06 Aug 2008 18:42

HMM(SAM) job SID0250881609279764 is not yet finished.

Flow stage update by auto on 06 Aug 2008 18:41

The entry "3cbtA01" has been submitted to the HMM (SAM) webservice.

Sam cath submit by auto on 06 Aug 2008 18:41

The entry "3cbtA01" has been submitted to the HMM (SAM) webservice.

Flow stage update by auto on 06 Aug 2008 18:35

Retrieved "3cbtA01" CATHEDRAL results for job ID SID5807910492920000 and inserted them into the database.

Domain scan cathedral cath by auto on 06 Aug 2008 18:34

Adding scan of type "DOMAIN_SCAN_CATHEDRAL_CATH" with 601 results for 3cbtA01

Update comment by auto on 06 Aug 2008 16:06

"3cbtA01" CATHEDRAL job SID5807910492920000 is not yet finished.

Cathedral cath submit by auto on 06 Aug 2008 15:55

The entry "3cbtA01" has been submitted to the CATHEDRAL webservice.

Flow stage update by auto on 06 Aug 2008 15:55

The entry "3cbtA01" has been submitted to the CATHEDRAL webservice.

Flow stage update by auto on 06 Aug 2008 11:28

ScanList with 11809 domains written to "/cath/data/current/scanlists/cathdb_current.fletcher/3cbtA01.scanlist" for "3cbtA01"

Write scan list by auto on 06 Aug 2008 11:27

Writing ScanList containing 11809 domains to file "/cath/data/current/scanlists/cathdb_current.fletcher/3cbtA01.scanlist" for domain "3cbtA01"

Update comment by auto on 06 Aug 2008 08:18

Waiting for 42 new domains (example : 3czvB00) to be processed so that they can be scanned against too.

Flow stage update by auto on 06 Aug 2008 03:33

No satisfactory AssignClose result found.

Flow stage update by auto on 06 Aug 2008 02:48

No in_process hits for Domain "3cbtA01" ready to be processed

Flow stage update by auto on 06 Aug 2008 02:48

NW result present for Domain "3cbtA01"

Flow stage update by auto on 05 Aug 2008 11:17

All required files are present for Domain "3cbtA01"

Flow stage update by auto on 04 Aug 2008 19:17

Beginning processing for Domain "3cbtA01"

Insertion by auto on 04 Aug 2008 17:12

Final ChopClose added based on similarity with "3bxtA"