CATH Domain: 3c8nD00 XML data for domain: 3c8nD00

Molscript image for 3c8nD00
3c8nD00
PDB coordinates for domain 3c8nD00

PDB 3c8n, Chain D, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.20 Alpha-Beta Barrel
3.20.20 TIM Barrel
3.20.20.30 FMN dependent fluorescent proteins Gene3D
3.20.20.30.6
3.20.20.30.6.1
3.20.20.30.6.1.1
3.20.20.30.6.1.1.1
3.20.20.30.6.1.1.1.1

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Segment boundaries for domain 3c8nD00

Chopping figure for domain 3c8nD00
DomainStart PDB ResidueStop PDB Residue
3c8nD00 3 334

Structural Neighbourhood (3 entries)

There are 3 matching structural neighberhood comparisons for CATH ID 3.20.20.30.6.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 3 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1m41A00 80.13 Alkanesulfonate monooxygenase [EC:1.14.14.5]Alkanesulfonate monooxygenaseAlkanesulfonate catabolic processAlkanesulfonate monooxygenase activityEscherichia coli K-12 3.20.20.30 328 17 84 2.56 3.03
2b81C00 77.22 Luciferase-like monooxygenaseLimonene and pinene degradationGamma-Hexachlorocyclohexane degradationNaphthalene and anthracene degradation[EC:1.14.-.-] 3.20.20.30 310 17 85 3.63 4.24
1tvlA00 76.05 Bacillus subtilisPutative monooxygenase moxC 3.20.20.30 390 13 75 3.28 4.32
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Displaying entries 1 to 3 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|3c8nD00
ELKLGYKASAEQFAPRELVELAVAAEAHGDSATVSDHFQPWRHQGGHAPFSLSWTAVGERTNRLLLGTSVLTPTFRYNPA
VIAQAFATGCLYPNRVFLGVGTGEALNEIATGYGAWPEFKERFARLRESVGLRQLWSDRVDFDGDYYRLKGASIYDVPDG
GVPVYIAAGGPAVAKYAGRAGDGFICTSGKGEELYTEKLPAVREGAAAADRSVDGIDKIEIKISYDPDPELANNTRFWAP
LSLTAEQKHSIDDPIEEKAADALPIEQIAKRWIVASDPDEAVEKVGQYVTWGLNHLVFHAPGHDQRRFLELFQSDLAPRL
RR
BLAST against CATH

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Domain COMBS Sequence 

>pdb|3c8nD00
ELKLGYKASAEQFAPRELVELAVAAEAHGXDSATVSDHFQPWRHQGGHAPFSLSWXTAVGERTNRLLLGTSVLTPTFRYN
PAVIAQAFATXGCLYPNRVFLGVGTGEALNEIATGYEGAWPEFKERFARLRESVGLXRQLWSGDRVDFDGDYYRLKGASI
YDVPDGGVPVYIAAGGPAVAKYAGRAGDGFICTSGKGEELYTEKLXPAVREGAAAADRSVDGIDKXIEIKISYDPDPELA
XNNTRFWAPLSLTAEQKHSIDDPIEXEKAADALPIEQIAKRWIVASDPDEAVEKVGQYVTWGLNHLVFHAPGHDQRRFLE
LFQSDLAPRLRRLG
BLAST against CATH

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Domain History Events (11)

Domain assigned by auto on 18 Feb 2009 20:09

Assigning to "3.20.20.30" based on similarity with "3c8nC00"

Flow stage update by auto on 18 Feb 2009 20:07

No in_process hits for Domain "3c8nD00" ready to be processed

Update comment by auto on 18 Feb 2009 19:36

Domain "3c8nD00" hits Domain "3c8nB00" (97.6047904191617% over 99.7014925373134%) which is currently in process

Update comment by auto on 18 Feb 2009 19:11

Domain "3c8nD00" hits Domain "3c8nC00" (97.6047904191617% over 100%) which is currently in process

Update comment by auto on 18 Feb 2009 18:40

Domain "3c8nD00" hits Domain "3b4yB00" (97.3053892215569% over 100%) which is currently in process

Update comment by auto on 22 Oct 2008 09:10

Domain "3c8nD00" hits Domain "3b4yA00" (97.3053892215569% over 100%) which is currently in process

Flow stage update by auto on 22 Oct 2008 08:40

Domain "3c8nD00" hits Domain "3b4yA00" (97.3053892215569% over 100%) which is currently in process

Flow stage update by auto on 22 Oct 2008 08:39

NW result present for Domain "3c8nD00"

Flow stage update by auto on 21 Oct 2008 08:34

All required files are present for Domain "3c8nD00"

Flow stage update by auto on 20 Oct 2008 18:49

Beginning processing for Domain "3c8nD00"

Insertion by auto on 20 Oct 2008 17:25

Final ChopClose added based on similarity with "3c8nC"