CATH Domain: 3c5rA00 XML data for domain: 3c5rA00

Molscript image for 3c5rA00
3c5rA00
PDB coordinates for domain 3c5rA00

PDB 3c5r, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.25 Alpha Horseshoe
1.25.40 Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat
1.25.40.20 Gene3D
1.25.40.20.9
1.25.40.20.9.1
1.25.40.20.9.1.1
1.25.40.20.9.1.1.1
1.25.40.20.9.1.1.1.1

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Segment boundaries for domain 3c5rA00

Chopping figure for domain 3c5rA00
DomainStart PDB ResidueStop PDB Residue
3c5rA00 -2 546

Structural Neighbourhood (10 entries)

There are 10 matching structural neighberhood comparisons for CATH ID 1.25.40.20.9.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 10 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1ympA00 91.38 Negative regulation of gene-specific transcriptionNeural tube developmentNeurogenic locus notch homolog protein 1Regulation of somitogenesisRegulation of epithelial cell proliferation involved in prostate gland development 1.25.40.20 131 24 93 1.12 1.19
3ehrA02 91.11 Osteoclast-stimulating factor 1OssificationIdentical protein bindingHomo sapiensSignal transduction 1.25.40.20 114 35 90 1.28 1.42
1ycsB01 90.11 Induction of apoptosisNF-kappaB bindingNegative regulation of cell cycleHomo sapiensApoptosis-stimulating of p53 protein 2 1.25.40.20 128 25 92 2.02 2.17
1bi7B00 85.48 Bladder cancerSenescencePathways in cancerNon-small cell lung cancerProtein binding 1.25.40.20 125 18 76 1.55 2.04
1uohA00 83.00 26S proteasome non-ATPase regulatory subunit 10CytoplasmProteasome regulatory particleActin cytoskeletonHomo sapiens 1.25.40.20 223 34 56 1.32 2.35
1iknD00 82.03 Cytoplasmic sequestering of NF-kappaBNeurotrophin signaling pathwayT cell receptor signaling pathwayApoptosisAdipocytokine signaling pathway 1.25.40.20 215 33 58 1.69 2.91
2dznA00 81.70 26S proteasome non-ATPase regulatory subunit 10Proteasome regulatory particle assemblyProbable 26S proteasome regulatory subunit p28NucleusSaccharomyces cerevisiae 1.25.40.20 226 25 55 1.43 2.59
1k1aA00 80.48 Transcription factor bindingBcl3/NF-kappaB2 complexNegative regulation of apoptosisCytoplasmI-kappaB kinase/NF-kappaB cascade 1.25.40.20 228 31 54 1.72 3.16
1wdyA00 75.75 2-5A-dependent ribonucleaseRibonuclease L [EC:3.1.26.-]Homo sapiens 1.25.40.20 285 27 43 2.19 4.99
1n11A00 70.68 Structural constituent of cytoskeletonMaintenance of epithelial cell apical/basal polarityEnzyme bindingHomo sapiensAnkyrin-1 1.25.40.20 404 38 30 1.42 4.59
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Displaying entries 1 to 10 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|3c5rA00
PFTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDA
AKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLP
BLAST against CATH

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Domain COMBS Sequence 

>pdb|3c5rA00
GIDPFTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPL
HDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNESSSAS
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 17 May 2008 17:24

Assigning to "1.25.40.20" based on similarity with "1n0rA00"

Flow stage update by auto on 17 May 2008 17:08

No in_process hits for Domain "3c5rA00" ready to be processed

Flow stage update by auto on 17 May 2008 17:08

NW result present for Domain "3c5rA00"

Flow stage update by auto on 17 May 2008 08:19

All required files are present for Domain "3c5rA00"

Flow stage update by auto on 16 May 2008 11:46

Beginning processing for Domain "3c5rA00"

Insertion by auto on 16 May 2008 11:07

Final ChopClose added based on similarity with "1n0rA"