CATH Domain: 3c3vA02 XML data for domain: 3c3vA02

Molscript image for 3c3vA02
3c3vA02
PDB coordinates for domain 3c3vA02

PDB 3c3v, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.120 Jelly Rolls
2.60.120.10 Jelly Rolls Gene3D
2.60.120.10.3
2.60.120.10.3.1
2.60.120.10.3.1.1
2.60.120.10.3.1.1.1
2.60.120.10.3.1.1.1.1

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Segment boundaries for domain 3c3vA02

Chopping figure for domain 3c3vA02
DomainStart PDB ResidueStop PDB Residue
3c3vA01 21 360
3c3vA02 361 521

Structural Neighbourhood (14 entries)

There are 14 matching structural neighberhood comparisons for CATH ID 2.60.120.10.3.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 14 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2ea7C02 87.75 7S globulin-1Vigna angularis 2.60.120.10 167 25 91 1.85 2.03
1j58A02 85.64 Bacillus subtilisOxalate decarboxylase [EC:4.1.1.2]Oxalate decarboxylase oxdCGlyoxylate and dicarboxylate metabolismMetabolic pathways 2.60.120.10 172 18 83 1.81 2.18
1dgwA00 83.55 CanavalinCanavalia ensiformis 2.60.120.10 178 14 86 2.76 3.19
1fi2A00 82.22 Hordeum vulgareOxalate oxidase 1 2.60.120.10 201 14 74 2.47 3.31
1j58A01 81.77 Bacillus subtilisOxalate decarboxylase [EC:4.1.1.2]Oxalate decarboxylase oxdCMetabolic pathwaysGlyoxylate and dicarboxylate metabolism 2.60.120.10 192 16 73 2.16 2.92
2d5fA01 80.26 Glycine maxGlycinin A3B4 subunit 2.60.120.10 226 19 69 2.46 3.56
3c3vA01 79.16 Arachis hypogaeaArachin Arah3 isoform 2.60.120.10 227 19 67 2.66 3.95
1o4tA00 78.63 Thermotoga maritimaPutative uncharacterized protein 2.60.120.10 115 10 66 2.78 4.20
1vj2A00 78.62 Thermotoga maritimaPutative uncharacterized protein 2.60.120.10 114 13 66 2.71 4.05
2i45D00 75.79 Neisseria meningitidis serogroup BPutative uncharacterized protein 2.60.120.10 96 14 55 2.58 4.66
1y9qA02 75.51 Vibrio choleraeTranscriptional regulator, HTH_3 family 2.60.120.10 90 14 56 2.67 4.76
2q30A01 74.24 Desulfovibrio desulfuricans subsp. desulfuricans str. G20Putative uncharacterized protein 2.60.120.10 85 11 52 2.28 4.31
2pytA00 74.21 Ethanolamine utilization protein EutQSalmonella enterica subsp. enterica serovar TyphimuriumEthanolamine utilization protein eutQ 2.60.120.10 118 12 59 2.87 4.79
1nlqE00 70.19 Nucleoplasmin-like proteinNucleophosmin 3Histone bindingDrosophila melanogasterSUMO binding 2.60.120.340 98 9 47 2.38 4.98
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Displaying entries 1 to 14 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|3c3vA02
GRNRSPDIYNPQAGSLKTANELNLLILRWLGLSAEYGNLYRNALFVPHYNTNAHSIIYALRGRAHVQVVDSNGNRVYDEE
LQEGHVLVVPQNFAVAGKSQSDNFEYVAFKTDSRPSIANLAGENSVIDNLPEEVVANSYGLPREQARQLKNNNPFKFFVP
P
BLAST against CATH

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Domain COMBS Sequence 

>pdb|3c3vA02
GRNRSPDIYNPQAGSLKTANELNLLILRWLGLSAEYGNLYRNALFVPHYNTNAHSIIYALRGRAHVQVVDSNGNRVYDEE
LQEGHVLVVPQNFAVAGKSQSDNFEYVAFKTDSRPSIANLAGENSVIDNLPEEVVANSYGLPREQARQLKNNNPFKFFVP
PSQQSPRAVA
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 06 Mar 2009 00:31

Assigning to "2.60.120.10" based on similarity with "1fxzA02"

Flow stage update by auto on 05 Mar 2009 23:29

No in_process hits for Domain "3c3vA02" ready to be processed

Flow stage update by auto on 05 Mar 2009 23:29

NW result present for Domain "3c3vA02"

Flow stage update by auto on 04 Mar 2009 11:45

All required files are present for Domain "3c3vA02"

Flow stage update by auto on 03 Mar 2009 20:57

Beginning processing for Domain "3c3vA02"

Insertion by auto on 03 Mar 2009 17:33

Final ChopClose added based on similarity with "2d5hE"