CATH Domain: 3c22D00 XML data for domain: 3c22D00

Molscript image for 3c22D00
3c22D00
PDB coordinates for domain 3c22D00

PDB 3c22, Chain D, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.10 Roll
3.10.100 Mannose-Binding Protein A; Chain A
3.10.100.10 Mannose-Binding Protein A, subunit A Gene3D
3.10.100.10.3
3.10.100.10.3.1
3.10.100.10.3.1.1
3.10.100.10.3.1.1.1
3.10.100.10.3.1.1.1.1

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Segment boundaries for domain 3c22D00

Chopping figure for domain 3c22D00
DomainStart PDB ResidueStop PDB Residue
3c22D00 195 328

Structural Neighbourhood (21 entries)

There are 21 matching structural neighberhood comparisons for CATH ID 3.10.100.10.3.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 21 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2h2tB01 89.04 Positive regulation of nitric-oxide synthase 2 biosynthetic processIntegral to plasma membraneHematopoietic cell lineagePositive regulation of nitric-oxide synthase activityPositive regulation of killing of cells of another organism 3.10.100.10 116 34 86 1.76 2.04
1xphA00 87.96 Integral to plasma membraneCell-cell recognitionVirion attachment to host cell surface receptorVirion bindingHomo sapiens 3.10.100.10 139 35 85 1.99 2.32
1kza100 87.63 Rattus norvegicusMannose bindingProtein self-associationMannose-binding lectinMannose-binding protein C 3.10.100.10 115 20 86 1.78 2.07
1jznA00 87.54 Galactose-specific lectinCrotalus atrox 3.10.100.10 135 25 83 2.23 2.66
3hupA00 87.26 CD69 antigenIntegral to plasma membraneEarly activation antigen CD69Homo sapiensTransmembrane receptor activity 3.10.100.10 114 26 83 2.11 2.52
1h8uB00 87.08 Bone marrow proteoglycanHomo sapiensBone marrow proteoglycanExtracellular regionSugar binding 3.10.100.10 116 19 81 1.87 2.30
1wmzA00 86.90 Cucumaria echinataLectin CEL-I, N-acetyl-D-galactosamine-specific C-type 3.10.100.10 140 31 81 2.33 2.86
1qddA00 86.67 Positive regulation of cell proliferationHomo sapiensGrowth factor activityLithostathine-1-alpha 3.10.100.10 144 25 77 2.31 2.97
1byfA00 86.21 LectinPolyandrocarpa misakiensis 3.10.100.10 123 19 86 2.48 2.85
1g1tA01 86.10 Response to tumor necrosis factorCoated pitHeterophilic cell-cell adhesionPerinuclear region of cytoplasmPhospholipase binding 3.10.100.10 119 28 83 2.08 2.49
3g8kA00 85.66 Mus musculusPlasma membraneLectin-related NK cell receptor LY49L1 3.10.100.10 127 22 89 3.38 3.77
3bdwA00 85.60 Killer cell lectin-like receptor subfamily D, member 1Natural killer cell mediated cytotoxicityNatural killer cells antigen CD94Antigen processing and presentationGraft-versus-host disease 3.10.100.10 123 19 90 2.93 3.25
1hq8A00 85.46 Positive regulation of interferon-gamma productionPositive regulation of natural killer cell mediated cytotoxicityPositive regulation of nitric oxide biosynthetic processMHC class I protein bindingNatural killer cell activation 3.10.100.10 123 21 87 2.48 2.82
1gz2A00 85.36 Peptidoglycan bindingShell calcificationLipopolysaccharide bindingGram-positive bacterial cell surface bindingOvocleidin-17 3.10.100.10 138 26 78 1.98 2.51
1sl6A00 84.29 Integral to plasma membraneCell-cell recognitionVirion attachment to host cell surface receptorVirion bindingHomo sapiens 3.10.100.10 168 33 70 2.31 3.29
1tn3A00 84.05 Skeletal system developmentHomo sapiensTetranectinProtein binding 3.10.100.10 135 18 83 2.52 3.01
1rtm100 81.88 Calcium ion bindingMannose bindingRattus norvegicusProtein homodimerization activityExtracellular space 3.10.100.10 149 17 75 2.85 3.79
1eslA00 81.49 Response to tumor necrosis factorCoated pitHeterophilic cell-cell adhesionPerinuclear region of cytoplasmPhospholipase binding 3.10.100.10 157 27 69 2.85 4.11
3fd4A00 80.19 Glycoprotein 42Human herpesvirus 4 (strain B95-8) 3.10.100.10 140 14 75 2.56 3.38
1rjhA00 76.00 Skeletal system developmentHomo sapiensTetranectinProtein binding 3.10.100.10 118 12 82 3.88 4.69
1cwvA05 74.18 InvasinYersinia pseudotuberculosis 3.10.100.10 100 10 59 2.89 4.83
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Displaying entries 1 to 21 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|3c22D00
VSQGWKYFKGNFYYFSLIPKTWYSAEQFCVSRNSHLTSVTSESEQEFLYKTAGGLIYWIGLTKAGMEGDWSWVDDTPFNK
VQSARFWIPGEPNNAGNNEHCGNIKAPSLQAWNDAPCDKTFLFICKRPYVPSEP
BLAST against CATH

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Domain COMBS Sequence 

>pdb|3c22D00
VSQGWKYFKGNFYYFSLIPKTWYSAEQFCVSRNSHLTSVTSESEQEFLYKTAGGLIYWIGLTKAGMEGDWSWVDDTPFNK
VQSARFWIPGEPNNAGNNEHCGNIKAPSLQAWNDAPCDKTFLFICKRPYVPSEP
BLAST against CATH

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Domain History Events (8)

Domain assigned by auto on 03 Mar 2009 21:40

Assigning to "3.10.100.10" based on similarity with "3c22A00"

Flow stage update by auto on 03 Mar 2009 21:37

No in_process hits for Domain "3c22D00" ready to be processed

Update comment by auto on 03 Mar 2009 21:12

Domain "3c22D00" hits Domain "3c22A00" (100% over 99.2537313432836%) which is currently in process

Flow stage update by auto on 03 Mar 2009 20:58

Domain "3c22D00" hits Domain "3c22A00" (100% over 99.2537313432836%) which is currently in process

Flow stage update by auto on 03 Mar 2009 20:57

NW result present for Domain "3c22D00"

Flow stage update by auto on 03 Mar 2009 20:57

All required files are present for Domain "3c22D00"

Flow stage update by auto on 19 Feb 2009 11:52

Beginning processing for Domain "3c22D00"

Insertion by auto on 19 Feb 2009 09:50

Final ChopClose added based on similarity with "3c22C"