CATH Domain: 3bzqA00 XML data for domain: 3bzqA00

Molscript image for 3bzqA00
3bzqA00
PDB coordinates for domain 3bzqA00

PDB 3bzq, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.30 2-Layer Sandwich
3.30.70 Alpha-Beta Plaits
3.30.70.120 Gene3D
3.30.70.120.1
3.30.70.120.1.1
3.30.70.120.1.1.1
3.30.70.120.1.1.1.1
3.30.70.120.1.1.1.1.1

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Segment boundaries for domain 3bzqA00

Chopping figure for domain 3bzqA00
DomainStart PDB ResidueStop PDB Residue
3bzqA00 -1 112

Structural Neighbourhood (48 entries)

There are 48 matching structural neighberhood comparisons for CATH ID 3.30.70.120.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 48 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3ce8A00 87.71 Shewanella baltica OS155Putative uncharacterized protein 3.30.70.120 87 12 85 2.03 2.36
2gx8C02 86.36 Bacillus cereus ATCC 14579NIF3-related protein 3.30.70.830 102 24 84 2.48 2.94
2nuhA00 85.09 Xylella fastidiosaPeriplasmic divalent cation tolerance proteinPeriplasmic divalent cation tolerance protein 3.30.70.830 104 7 87 2.32 2.65
2dclA00 84.42 Pyrococcus horikoshiiUPF0166 protein PH1503 3.30.70.120 99 19 86 2.42 2.79
1nzaA00 83.85 Thermus thermophilus HB8Divalent-cation tolerance protein cutAPeriplasmic divalent cation tolerance protein 3.30.70.830 103 6 88 2.78 3.15
2vd3A03 83.50 Methanothermobacter thermautotrophicus str. Delta HATP phosphoribosyltransferaseATP phosphoribosyltransferase [EC:2.4.2.17]Histidine metabolismMetabolic pathways 3.30.70.120 74 22 74 2.47 3.30
3c19A01 82.81 Methanopyrus kandleriUncharacterized conserved protein 3.30.70.1380 98 15 81 2.98 3.64
1nh8A03 82.35 Histidine metabolismMetabolic pathwaysATP phosphoribosyltransferaseATP phosphoribosyltransferase [EC:2.4.2.17]Mycobacterium tuberculosis 3.30.70.120 67 11 67 2.52 3.72
1darA05 82.18 Thermus thermophilus HB8Elongation factor GElongation factor EF-G [EC:3.6.5.3] 3.30.70.240 87 6 78 2.98 3.78
1xmbA02 82.12 Auxin metabolic processArabidopsis thalianaIAA-Ala conjugate hydrolase activityIAA-amino acid hydrolase ILR1-like 2 3.30.70.360 101 10 74 2.78 3.74
1kr4A00 82.03 Thermotoga maritimaDivalent-cation tolerance protein cutAPeriplasmic divalent cation tolerance protein 3.30.70.830 107 6 87 3.09 3.52
1y7pB01 81.91 Archaeoglobus fulgidusUncharacterized protein AF_1403 3.30.70.260 80 11 75 2.94 3.88
2f1fA01 81.68 Valine, leucine and isoleucine biosynthesisMetabolic pathwaysButanoate metabolismC5-Branched dibasic acid metabolismPantothenate and CoA biosynthesis 3.30.70.260 79 8 73 2.66 3.61
1q5yD00 81.61 CopG family transcriptional regulator, nickel-responsive regulatorNickel-responsive regulatorProtein bindingEscherichia coli K-12 3.30.70.1150 80 5 75 3.06 4.04
1vi7A02 81.52 IMPACT family member yigZProtein bindingEscherichia coli K-12 3.30.70.240 71 9 71 2.88 4.02
2nzcA00 80.96 Thermotoga maritimaPutative uncharacterized protein 3.30.70.1150 77 11 72 3.06 4.21
1u8sA02 80.65 Glycine cleavage system transcriptional repressor, putativeGlycine cleavage system transcriptional repressorVibrio cholerae 3.30.70.260 84 8 79 3.36 4.21
1u7lA01 80.43 V-type H+-transporting ATPase subunit C [EC:3.6.3.14]Oxidative phosphorylationVacuolar acidificationProtein bindingVacuolar proton-transporting V-type ATPase, V1 domain 3.30.70.1180 91 5 74 2.99 4.00
3e3xA02 80.23 Vibrio parahaemolyticusBipAGTP-binding protein 3.30.70.240 83 6 71 2.92 4.07
2ivyA01 79.81 Sulfolobus solfataricusPutative uncharacterized protein 3.30.70.240 74 12 68 2.58 3.76
1n0uA05 79.80 Positive regulation of translational elongationTranslation elongation factor activityElongation factor 2Elongation factor EF-2 [EC:3.6.5.3]Saccharomyces cerevisiae 3.30.70.240 112 3 68 2.92 4.25
2nyiA02 79.39 3.30.70.260 89 8 81 3.78 4.62
2nyiA01 79.03 3.30.70.260 77 6 75 3.41 4.50
1u8sA01 78.86 Glycine cleavage system transcriptional repressor, putativeGlycine cleavage system transcriptional repressorVibrio cholerae 3.30.70.260 86 10 82 3.51 4.24
1utaA00 78.72 Membrane fractionCell cycle cytokinesisCell division protein FtsNCell division protein ftsNProtein binding 3.30.70.1070 77 9 71 2.52 3.51
1j4wA01 78.55 Transcription from RNA polymerase II promoterFar upstream element-binding proteinSequence-specific DNA binding transcription factor activityFar upstream element-binding protein 1Nucleus 3.30.1370.10 74 14 66 2.60 3.90
2qmxA03 78.44 Prephenate dehydratase [EC:4.2.1.51]Phenylalanine, tyrosine and tryptophan biosynthesisChlorobaculum tepidumMetabolic pathwaysPrephenate dehydratase 3.30.70.260 90 6 81 3.98 4.86
1mlaA01 78.13 Fatty acid biosynthesisMetabolic pathwaysMalonyl CoA-acyl carrier protein transacylase[acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]Escherichia coli K-12 3.30.70.250 73 12 66 2.29 3.44
2i0xA01 77.86 Pyrococcus furiosusPutative uncharacterized protein 3.30.70.240 66 7 64 2.68 4.15
1sc6A03 77.57 Glycine, serine and threonine metabolismMetabolic pathwaysD-3-phosphoglycerate dehydrogenase [EC:1.1.1.95]D-3-phosphoglycerate dehydrogenaseEscherichia coli K-12 3.30.70.260 79 11 69 3.36 4.82
1i1gA02 77.56 Pyrococcus furiosusHTH-type transcriptional regulator lrpALrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA 3.30.70.920 77 15 72 2.91 4.00
1lfpA03 77.52 UPF0082 protein aq_1575Aquifex aeolicus 3.30.70.980 73 8 71 3.16 4.41
2qmwA03 77.41 Phenylalanine, tyrosine and tryptophan biosynthesisMetabolic pathwaysPrephenate dehydratase [EC:4.2.1.51]Similar to chorismate mutaseStaphylococcus aureus subsp. aureus Mu50 3.30.70.260 73 13 66 2.90 4.35
3c6kA01 77.27 Spermine synthaseArginine and proline metabolismSpermine synthase [EC:2.5.1.22]Glutathione metabolismMetabolic pathways 3.30.160.110 94 8 61 2.63 4.27
1xtzA02 77.10 Identical protein bindingNucleusRibose-5-phosphate isomerasePyridoxine biosynthetic processRibose 5-phosphate isomerase A [EC:5.3.1.6] 3.30.70.260 84 5 64 3.14 4.86
2iboA00 77.08 Streptococcus pneumoniaePutative uncharacterized protein 3.30.70.930 87 9 78 3.92 4.98
2anrA02 77.02 RNA-binding protein Nova-1Synaptic transmissionHomo sapiensLocomotory behavior 3.30.1370.10 74 10 66 3.21 4.81
1nm2A01 76.99 Fatty acid biosynthesisStreptomyces coelicolorMalonyl CoA:acyl carrier protein malonyltransferase[acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]Metabolic pathways 3.30.70.250 68 11 65 2.48 3.78
1kn6A00 76.97 Mus musculusPeptide hormone processingSerine-type endopeptidase activityNeuroendocrine convertase 1Proprotein convertase subtilisin/kexin type 1 [EC:3.4.21.93] 3.30.70.850 73 5 67 2.65 3.92
2w25A02 76.91 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory proteinLeucine-responsive regulatory proteinMycobacterium tuberculosis 3.30.70.920 81 11 68 2.89 4.21
1s99A02 76.45 Bacillus subtilisPutative HMP/thiamine-binding protein ykoF 3.30.70.930 81 12 75 3.46 4.57
1vlyA02 76.35 RNA modificationTRNA-modifying protein ygfZFolic acid bindingEscherichia coli K-12 3.30.70.1400 84 7 64 2.97 4.59
1in0A01 76.14 Hypothetical proteinHaemophilus influenzaeUPF0234 protein HI_1034 3.30.70.860 70 8 68 3.12 4.54
2od4B01 75.60 3.30.70.900 81 9 62 2.84 4.53
1o8bA02 75.20 Pentose phosphate pathwayMetabolic pathwaysRibose 5-phosphate isomerase A [EC:5.3.1.6]Escherichia coli K-12Ribose-5-phosphate isomerase A 3.30.70.260 69 11 65 2.83 4.31
1yx2A02 74.71 Nitrogen metabolismAminomethyltransferase [EC:2.1.2.10]One carbon pool by folateBacillus subtilisGlycine, serine and threonine metabolism 3.30.70.1400 81 11 61 2.60 4.22
1mw7A03 74.63 Helicobacter pyloriUPF0082 protein HP_0162 3.30.70.980 75 8 67 3.30 4.88
1rwuA00 74.16 Hypothetical proteinUPF0250 protein ybeDEscherichia coli K-12 3.30.70.1460 87 6 72 3.40 4.67
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Displaying entries 1 to 48 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|3bzqA00
GHMKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRDFVPKVRIEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWV
SPVDTIVRVRTGERGHDAL
BLAST against CATH

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Domain COMBS Sequence 

>pdb|3bzqA00
GHMKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVRIEVVVDDSIVDKVVDSIV
RAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 06 Apr 2008 11:20

Assigning to "3.30.70.120" based on similarity with "1hwuA00"

Flow stage update by auto on 06 Apr 2008 11:05

No in_process hits for Domain "3bzqA00" ready to be processed

Flow stage update by auto on 06 Apr 2008 11:05

NW result present for Domain "3bzqA00"

Flow stage update by auto on 05 Apr 2008 08:22

All required files are present for Domain "3bzqA00"

Flow stage update by auto on 05 Apr 2008 04:00

Beginning processing for Domain "3bzqA00"

Insertion by auto on 05 Apr 2008 02:23

Final ChopClose added based on similarity with "1hwuA"