CATH Domain: 3bw1A00 XML data for domain: 3bw1A00

Molscript image for 3bw1A00
3bw1A00
PDB coordinates for domain 3bw1A00

PDB 3bw1, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.30 Roll
2.30.30 SH3 type barrels.
2.30.30.100 Gene3D
2.30.30.100.16
2.30.30.100.16.1
2.30.30.100.16.1.1
2.30.30.100.16.1.1.1
2.30.30.100.16.1.1.1.1

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Segment boundaries for domain 3bw1A00

Chopping figure for domain 3bw1A00
DomainStart PDB ResidueStop PDB Residue
3bw1A00 -2 89

Structural Neighbourhood (4 entries)

There are 4 matching structural neighberhood comparisons for CATH ID 2.30.30.100.16.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 4 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1ib8A02 79.35 Hypothetical proteinRibosome maturation factor rimPStreptococcus pneumoniae 2.30.30.180 67 17 73 2.97 4.05
1biaA03 77.44 Biotin metabolismDNA bindingBirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]Bifunctional protein birABiotin-[acetyl-CoA-carboxylase] ligase activity 2.30.30.100 47 12 54 2.42 4.43
1nh2D02 76.98 Transcription factor TFIIA complexGeneral RNA polymerase II transcription factor activityProtein bindingBasal transcription factorsTranscription initiation factor IIA small subunit 2.30.18.10 48 12 52 2.54 4.85
1nvpD02 76.51 Basal transcription factorsTranscription factor TFIIA complexGeneral RNA polymerase II transcription factor activityProtein homodimerization activityTranscription coactivator activity 2.30.18.10 46 15 50 2.15 4.30
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Displaying entries 1 to 4 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|3bw1A00
HHMETPLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERRCEMVFIRGDTVTLIST
PSAVEI
BLAST against CATH

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Domain COMBS Sequence 

>pdb|3bw1A00
MHHHHHHMETPLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERRCEMVFIRGDTV
TLISTPSEDDDGAVEI
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 29 Mar 2008 23:16

Assigning to "2.30.30.100" based on similarity with "1lojA00"

Flow stage update by auto on 29 Mar 2008 23:04

No in_process hits for Domain "3bw1A00" ready to be processed

Flow stage update by auto on 29 Mar 2008 23:04

NW result present for Domain "3bw1A00"

Flow stage update by auto on 29 Mar 2008 11:05

All required files are present for Domain "3bw1A00"

Flow stage update by auto on 28 Mar 2008 11:14

Beginning processing for Domain "3bw1A00"

Insertion by auto on 28 Mar 2008 11:09

Final ChopClose added based on similarity with "1lojA"