Domain assigned by auto on 15 Mar 2008 20:24
Assigning to "3.20.20.210" based on similarity with "3bq6A01"
CATH Domain: 3bq5A01
3bq5A01
PDB 3bq5, Chain A, Domain 1
| CATH Code | Level Description | Links |
|---|---|---|
 3
| Alpha Beta | |
 3.20
| Alpha-Beta Barrel | |
 3.20.20
| TIM Barrel | |
 3.20.20.210
| Gene3D | |
 3.20.20.210.4
| ||
 3.20.20.210.4.1
| ||
 3.20.20.210.4.1.1
| ||
 3.20.20.210.4.1.1.1
| ||
 3.20.20.210.4.1.1.1.1
|
Segment boundaries for domain 3bq5A01
| Domain | Start PDB Residue | Stop PDB Residue |
|---|---|---|
| 3bq5A01 | 1 | 359 |
| 3bq5A01 | 483 | 497 |
| 3bq5A02 | 367 | 482 |
| 3bq5A02 | 498 | 729 |
Structural Neighbourhood (1 entries)
There are 1 matching structural neighberhood comparisons for CATH ID 3.20.20.210.4.1.1.1.1 (SIMAX score < 5)
[1]
Displaying entries 1 to 1 (page 1 of 1)
| Match Depth | Match | SSAP score | Match Keywords | Match Superfamily | Length | Sequence Id | Overlap | RMSD | SIMAX |
|---|---|---|---|---|---|---|---|---|---|
|
1ypxA00 | 76.72 | 3.20.20.210 | 315 | 14 | 75 | 3.54 | 4.68 |
[1]
Displaying entries 1 to 1 (page 1 of 1)
Domain ATOM Sequence
>pdb|3bq5A01 TKAYAFGFPKIGEKREFKKALEDFWKGKITEEQFEEEMNKLRMYMVENYRKNVDVIPSNELSYYDFVLDTAVMVGAVPER FGEYRGLSTYFDMARGGKALEMTKFFNTNYHYLVPEIETEEFYLLENKPLEDYLFFKSKGIETAPWVIGPFTFLYLSKRN GEWIRRPNQMEKLLESLVSVYKEVFEKLVENGCKEILVNEPAFVCDLEKAHWDLILNVYRELSEFPLTVFTYYDSVSDYE ACVSLPVKRLHFDFVSNEENLKNLEKHGFPEDKKLVAGVINGRQPWKVDLRKVASLVEKLGASAISNSCPLFHLPVTLEL ENNLPGGLKEKLAFAKEKLEELKMLKDFLEGKTFDLPNVQNGWVLSYGSRCYRP
Domain COMBS Sequence
>pdb|3bq5A01 TKAYAFGFPKIGEKREFKKALEDFWKGKITEEQFEEEMNKLRMYMVENYRKNVDVIPSNELSYYDFVLDTAVMVGAVPER FGEYRGLSTYFDMARGGKALEMTKFFNTNYHYLVPEIETEEFYLLENKPLEDYLFFKSKGIETAPWVIGPFTFLYLSKRN GEWIRRPNQMEKLLESLVSVYKEVFEKLVENGCKEILVNEPAFVCDLEKAHWDLILNVYRELSEFPLTVFTYYDSVSDYE ACVSLPVKRLHFDFVSNEENLKNLEKHGFPEDKKLVAGVINGRQPWKVDLRKVASLVEKLGASAISNSCPLFHLPVTLEL ENNLPGGLKEKLAFAKEKLEELKMLKDFLEGKTFDLPNVQNGWVLSYGSRCYRP
Domain History Events (9)
Flow stage update by auto on 15 Mar 2008 20:23
No in_process hits for Domain "3bq5A01" ready to be processed
Update comment by auto on 15 Mar 2008 20:20
Domain "3bq5A01" hits Domain "3bq5B01" (100% over 98.4210526315789%) which is currently in process
Update comment by auto on 15 Mar 2008 20:15
Domain "3bq5A01" hits Domain "3bq6A01" (100% over 99.4652406417112%) which is currently in process
Flow stage update by auto on 15 Mar 2008 20:05
Domain "3bq5A01" hits Domain "3bq6A01" (100% over 99.4652406417112%) which is currently in process
Flow stage update by auto on 15 Mar 2008 20:05
NW result present for Domain "3bq5A01"
Flow stage update by auto on 15 Mar 2008 08:07
All required files are present for Domain "3bq5A01"
Flow stage update by auto on 14 Mar 2008 14:42
Beginning processing for Domain "3bq5A01"
Insertion by auto on 14 Mar 2008 14:18
Final ChopClose added based on similarity with "3bq5B"
