CATH Domain: 3bkpA00 XML data for domain: 3bkpA00

Molscript image for 3bkpA00
3bkpA00
PDB coordinates for domain 3bkpA00

PDB 3bkp, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.40 Beta Barrel
2.40.100 Cyclophilin
2.40.100.10 Cyclophilin Gene3D
2.40.100.10.5
2.40.100.10.5.1
2.40.100.10.5.1.1
2.40.100.10.5.1.1.1
2.40.100.10.5.1.1.1.1

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Segment boundaries for domain 3bkpA00

Chopping figure for domain 3bkpA00
DomainStart PDB ResidueStop PDB Residue
3bkpA00 12 206

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 2.40.100.10.5.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3bo7B00 90.46 Peptidyl-prolyl cis-trans isomerase, cyclophilin-typeToxoplasma gondii 2.40.100.10 166 36 89 2.12 2.38
1mzwA00 88.79 SpliceosomePeptidyl-prolyl isomerase H (cyclophilin H) [EC:5.2.1.8]Cyclosporin A bindingPeptidyl-prolyl cis-trans isomerase activityProtein binding 2.40.100.10 173 31 87 1.84 2.10
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Displaying entries 1 to 2 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|3bkpA00
ENLYFQGSTRGKVVLHTSLGDLDVELWARECPLACRNFVQLCLEGYYVNTIFHRVVKDFIVQGGDPTGTGRGGADTTFDG
KPFDVETHPRLKFRYRGLVGVANLGTNGNQFFITLARADVLNNAYTLFGKVTGHTLYNLMKFNDLEVGKEDRPMTPPFIK
SVDVLWNPFEDLVPRRLPD
BLAST against CATH

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Domain COMBS Sequence 

>pdb|3bkpA00
MHHHHHHSSGRENLYFQGSTRGKVVLHTSLGDLDVELWARECPLACRNFVQLCLEGYYVNTIFHRVVKDFIVQGGDPTGT
GRGGADTTFDGKPFDVETHPRLKFRYRGLVGVANLGRSSKDAENDERGRSLGTNGNQFFITLARADVLNNAYTLFGKVTG
HTLYNLMKFNDLEVGKEDRPMTPPFIKSVDVLWNPFEDLVPRRLPD
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 04 Aug 2008 19:33

Assigning to "2.40.100.10" based on similarity with "2poeA00"

Flow stage update by auto on 04 Aug 2008 19:17

No in_process hits for Domain "3bkpA00" ready to be processed

Flow stage update by auto on 04 Aug 2008 19:17

NW result present for Domain "3bkpA00"

Flow stage update by auto on 30 Jul 2008 08:28

All required files are present for Domain "3bkpA00"

Flow stage update by auto on 30 Jul 2008 02:04

Beginning processing for Domain "3bkpA00"

Insertion by auto on 29 Jul 2008 20:46

Final ChopClose added based on similarity with "1zkcA"