CATH Domain: 3beoA01 XML data for domain: 3beoA01

Molscript image for 3beoA01
3beoA01
PDB coordinates for domain 3beoA01

PDB 3beo, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.2000 Glycogen Phosphorylase B; Gene3D
3.40.50.2000.3
3.40.50.2000.3.1
3.40.50.2000.3.1.1
3.40.50.2000.3.1.1.1
3.40.50.2000.3.1.1.1.1

[top]
Segment boundaries for domain 3beoA01

Chopping figure for domain 3beoA01
DomainStart PDB ResidueStop PDB Residue
3beoA01 -3 191
3beoA01 353 371
3beoA02 192 352

Structural Neighbourhood (1 entries)

There are 1 matching structural neighberhood comparisons for CATH ID 3.40.50.2000.3.1.1.1.1 (SIMAX score < 5)

[1]
Displaying entries 1 to 1 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1f0kA01 80.75 Peptidoglycan biosynthesisMetabolic pathwaysUDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferaseUndecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity 3.40.50.2000 175 17 77 3.17 4.11
[1]
Displaying entries 1 to 1 (page 1 of 1)


[top]
Domain ATOM Sequence 

>pdb|3beoA01
GPVDMTERLKVMTIFGTRPEAIKMAPLVLELQKHPEKIESIVTVTAQHRQMLDQVLSIFGITPDFDLNIMKDRQTLIDIT
TRGLEGLDKVMKEAKPDIVLVHGDTTTTFIASLAAFYNQIPVGHVEAGLRTWDKYSPYPEEMNRQLTGVMADLHFSPTAK
SATNLQKENKDESRIFITGNTAIDALKTTVKETYSGDGRASERIVEAILKHFNK
BLAST against CATH

[top]
Domain COMBS Sequence 

>pdb|3beoA01
GPVDMTERLKVMTIFGTRPEAIKMAPLVLELQKHPEKIESIVTVTAQHRQMLDQVLSIFGITPDFDLNIMKDRQTLIDIT
TRGLEGLDKVMKEAKPDIVLVHGDTTTTFIASLAAFYNQIPVGHVEAGLRTWDKYSPYPEEMNRQLTGVMADLHFSPTAK
SATNLQKENKDESRIFITGNTAIDALKTTVKETYSGDGRASERIVEAILKHFNK
BLAST against CATH

[top]
Domain History Events (6)

Domain assigned by auto on 25 Feb 2008 14:19

Assigning to "3.40.50.2000" based on similarity with "1o6cA01"

Flow stage update by auto on 25 Feb 2008 14:05

No in_process hits for Domain "3beoA01" ready to be processed

Flow stage update by auto on 25 Feb 2008 14:05

NW result present for Domain "3beoA01"

Flow stage update by auto on 24 Feb 2008 08:43

All required files are present for Domain "3beoA01"

Flow stage update by auto on 23 Feb 2008 12:17

Beginning processing for Domain "3beoA01"

Insertion by auto on 23 Feb 2008 08:41

Final ChopClose added based on similarity with "1o6cA"