CATH Domain: 3bdwA00 XML data for domain: 3bdwA00

Molscript image for 3bdwA00
3bdwA00
PDB coordinates for domain 3bdwA00

PDB 3bdw, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.10 Roll
3.10.100 Mannose-Binding Protein A; Chain A
3.10.100.10 Mannose-Binding Protein A, subunit A Gene3D
3.10.100.10.27
3.10.100.10.27.1
3.10.100.10.27.1.1
3.10.100.10.27.1.1.1
3.10.100.10.27.1.1.1.1

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Segment boundaries for domain 3bdwA00

Chopping figure for domain 3bdwA00
DomainStart PDB ResidueStop PDB Residue
3bdwA00 57 179

Structural Neighbourhood (5 entries)

There are 5 matching structural neighberhood comparisons for CATH ID 3.10.100.10.27.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 5 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1sl6A00 83.13 Integral to plasma membraneCell-cell recognitionVirion attachment to host cell surface receptorVirion bindingHomo sapiens 3.10.100.10 168 28 72 2.77 3.81
1rjhA00 81.59 Skeletal system developmentHomo sapiensTetranectinProtein binding 3.10.100.10 118 21 84 3.12 3.69
1f00I03 79.31 Pathogenic Escherichia coli infectionIntiminIntiminProtein bindingEscherichia coli O127:H6 str. E2348/69 3.10.100.10 98 11 66 2.80 4.20
1cwvA05 77.74 InvasinYersinia pseudotuberculosis 3.10.100.10 100 11 65 2.95 4.54
2pf5D00 76.11 Cell-cell signalingHyaluronic acid bindingHomo sapiensTumor necrosis factor-inducible gene 6 proteinSignal transduction 3.10.100.10 91 7 60 2.92 4.85
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Displaying entries 1 to 5 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|3bdwA00
DCCSCQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDELDFMSSSQQFYWIGLSYSEEHTAWLWENGSAL
SQYLFPSFETFNTKNCIAYNPNGNALDESCEDKNRYICKQQLI
BLAST against CATH

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Domain COMBS Sequence 

>pdb|3bdwA00
DCCSCQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDELDFMSSSQQFYWIGLSYSEEHTAWLWENGSAL
SQYLFPSFETFNTKNCIAYNPNGNALDESCEDKNRYICKQQLI
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 05 Jan 2008 14:15

Assigning to "3.10.100.10" based on similarity with "1b6eA00"

Flow stage update by auto on 05 Jan 2008 14:03

No in_process hits for Domain "3bdwA00" ready to be processed

Flow stage update by auto on 05 Jan 2008 14:03

NW result present for Domain "3bdwA00"

Flow stage update by auto on 05 Jan 2008 08:05

All required files are present for Domain "3bdwA00"

Flow stage update by auto on 04 Jan 2008 08:16

Beginning processing for Domain "3bdwA00"

Insertion by auto on 04 Jan 2008 08:10

Final ChopClose added based on similarity with "1b6eA"