CATH Domain: 3b5oA00 XML data for domain: 3b5oA00

Molscript image for 3b5oA00
3b5oA00
PDB coordinates for domain 3b5oA00

PDB 3b5o, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.20 Up-down Bundle
1.20.910 Heme Oxygenase; Chain A
1.20.910.10 Heme Oxygenase; Chain A Gene3D
1.20.910.10.3
1.20.910.10.3.1
1.20.910.10.3.1.1
1.20.910.10.3.1.1.1
1.20.910.10.3.1.1.1.1

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Segment boundaries for domain 3b5oA00

Chopping figure for domain 3b5oA00
DomainStart PDB ResidueStop PDB Residue
3b5oA00 0 236

Structural Neighbourhood (5 entries)

There are 5 matching structural neighberhood comparisons for CATH ID 1.20.910.10.3.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 5 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3bjdA02 81.83 Pseudomonas aeruginosaPutative uncharacterized protein 1.20.910.10 217 16 91 3.04 3.32
2qcxA00 80.06 Thiamine metabolismBacillus subtilisThiaminase-2Transcriptional activator TenA [EC:3.5.99.2] 1.20.910.10 222 9 89 4.33 4.83
1rtwB00 80.04 Pyrococcus furiosusTranscriptional activator, putative 1.20.910.10 204 11 84 3.71 4.38
1rcwB00 79.66 Chlamydia trachomatisPqqC-like proteinPyrroloquinoline-quinone synthase [EC:1.3.3.11] 1.20.910.10 210 11 87 3.52 4.03
3hlxA00 77.19 Pyrroloquinoline-quinone synthase [EC:1.3.3.11]Klebsiella pneumoniae subsp. pneumoniae MGH 78578Pyrroloquinoline-quinone synthase 1.20.910.10 247 8 86 3.95 4.58
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Displaying entries 1 to 5 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|3b5oA00
GEFNHLTKQLNQLLAQDYVAFSITENPVVQLSQASFAQIAYVQQYSIFPKELVGFTELARRKALGAGWNGVAQELQENID
EEGSTTGGISHYTLLADGLEEGLGVAVKNTPSVATSKLLRTVLSLFDRQVDYVLGATYAIEATSIPELTLIVKLVEWLHE
GAIPKDLQYFFSKHLDAGLRTSVAAYIQPEEFGEFAAGFRAIDAQVWWQELAQEAISSEVVLS
BLAST against CATH

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Domain COMBS Sequence 

>pdb|3b5oA00
GXEFNHLTKQLNQLLAQDYVAFSITENPVVQXLSQASFAQIAYVXQQYSIFPKELVGFTELARRKALGAGWNGVAQELQE
NIDEEXGSTTGGISHYTLLADGLEEGLGVAVKNTXPSVATSKLLRTVLSLFDRQVDYVLGATYAIEATSIPELTLIVKLV
EWLHEGAIPKDLQYFFSKHLDEWEIEHEAGLRTSVAAYIQPEEFGEFAAGFRAXIDAXQVWWQELAQEAISSEVVLSTAI
AQHH
BLAST against CATH

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Domain History Events (8)

Domain assigned by auto on 26 Jan 2009 14:44

Assigning to "1.20.910.10" based on similarity with "3b5pA00"

Flow stage update by auto on 26 Jan 2009 14:30

No in_process hits for Domain "3b5oA00" ready to be processed

Update comment by auto on 12 Oct 2008 21:14

Domain "3b5oA00" hits Domain "3b5pA00" (97.1311475409836% over 100%) which is currently in process

Flow stage update by auto on 12 Oct 2008 21:11

Domain "3b5oA00" hits Domain "3b5pA00" (97.1311475409836% over 100%) which is currently in process

Flow stage update by auto on 12 Oct 2008 21:11

NW result present for Domain "3b5oA00"

Flow stage update by auto on 11 Oct 2008 08:41

All required files are present for Domain "3b5oA00"

Flow stage update by auto on 10 Oct 2008 17:39

Beginning processing for Domain "3b5oA00"

Insertion by auto on 10 Oct 2008 17:07

Final ChopClose added based on similarity with "3b5pA"