CATH Domain: 3b4wA01 XML data for domain: 3b4wA01

Molscript image for 3b4wA01
3b4wA01
PDB coordinates for domain 3b4wA01

PDB 3b4w, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.605 Aldehyde Dehydrogenase; Chain A, domain 1
3.40.605.10 Aldehyde Dehydrogenase; Chain A, domain 1 Gene3D
3.40.605.10.3
3.40.605.10.3.1
3.40.605.10.3.1.1
3.40.605.10.3.1.1.1
3.40.605.10.3.1.1.1.1

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Segment boundaries for domain 3b4wA01

Chopping figure for domain 3b4wA01
DomainStart PDB ResidueStop PDB Residue
3b4wA01 4 256
3b4wA01 448 486
3b4wA02 257 447

Structural Neighbourhood (9 entries)

There are 9 matching structural neighberhood comparisons for CATH ID 3.40.605.10.3.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 9 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2w8nA01 90.18 Succinate-semialdehyde dehydrogenase activitySoluble fractionGamma-aminobutyric acid catabolic processCentral nervous system developmentMetabolic pathways 3.40.605.10 289 31 96 1.76 1.82
3ed6A01 89.46 Glycine, serine and threonine metabolismBetaine-aldehyde dehydrogenase [EC:1.2.1.8]Staphylococcus aureusPutative uncharacterized protein 3.40.605.10 308 31 94 2.30 2.44
1t90A01 89.14 Methylmalonate semialdehyde dehydrogenase [acylating]Bacillus subtilisMethylmalonate-semialdehyde dehydrogenase [EC:1.2.1.27]Valine, leucine and isoleucine degradationPropanoate metabolism 3.40.605.10 280 27 94 1.91 2.01
3k2wB01 88.89 Betaine-aldehyde dehydrogenaseLactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21]Pseudoalteromonas atlantica T6cPyruvate metabolismGlyoxylate and dicarboxylate metabolism 3.40.605.10 292 31 97 1.76 1.81
1euhA01 87.49 Glyceraldehyde-3-phosphate dehydrogenase (NADP) [EC:1.2.1.9]Glycolysis / GluconeogenesisNADP-dependent glyceraldehyde-3-phosphate dehydrogenaseMetabolic pathwaysStreptococcus mutans 3.40.605.10 274 31 91 1.69 1.86
1uxtA01 87.10 Thermoproteus tenaxGlyceraldehyde-3-phosphate dehydrogenase (NADP+) 3.40.605.10 273 24 91 1.84 2.01
1a4sA01 86.54 Betaine aldehyde dehydrogenaseGadus callarias 3.40.605.10 260 33 85 1.92 2.24
1ez0B01 84.22 NADP-dependent fatty aldehyde dehydrogenaseVibrio harveyi 3.40.605.10 312 21 86 2.87 3.33
1ad3A01 82.74 Tyrosine metabolismRattus norvegicusResponse to glucocorticoid stimulus3-chloroallyl aldehyde dehydrogenase activityCytosol 3.40.605.10 247 25 79 2.65 3.34
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Displaying entries 1 to 9 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|3b4wA01
SATEYDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKML
AERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLA
VNKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGRR
AAEMLKPCTLELGPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVLLPMGYTV
BLAST against CATH

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Domain COMBS Sequence 

>pdb|3b4wA01
MSDSATEYDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAV
KMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPL
FLAVNKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREV
GRRAAEMLKPCTLELGPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVLLPMGYTVAGSHHHHHH
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 04 Dec 2007 22:13

Assigning to "3.40.605.10" based on similarity with "1cw3A01"

Flow stage update by auto on 04 Dec 2007 22:03

No in_process hits for Domain "3b4wA01" ready to be processed

Flow stage update by auto on 04 Dec 2007 22:03

NW result present for Domain "3b4wA01"

Flow stage update by auto on 04 Dec 2007 10:04

All required files are present for Domain "3b4wA01"

Flow stage update by auto on 03 Dec 2007 07:25

Beginning processing for Domain "3b4wA01"

Insertion by auto on 03 Dec 2007 06:21

Final ChopClose added based on similarity with "1cw3A"