CATH Domain: 2vq8A00 XML data for domain: 2vq8A00

Molscript image for 2vq8A00
2vq8A00
PDB coordinates for domain 2vq8A00

PDB 2vq8, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.10 Roll
3.10.130 P-30 Protein
3.10.130.10 P-30 Protein Gene3D
3.10.130.10.4
3.10.130.10.4.1
3.10.130.10.4.1.1
3.10.130.10.4.1.1.1
3.10.130.10.4.1.1.1.1

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Segment boundaries for domain 2vq8A00

Chopping figure for domain 2vq8A00
DomainStart PDB ResidueStop PDB Residue
2vq8A00 -2 126

Structural Neighbourhood (4 entries)

There are 4 matching structural neighberhood comparisons for CATH ID 3.10.130.10.4.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 4 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1agiA00 89.03 Receptor bindingPositive regulation of protein secretionActin bindingExtracellular spaceAngiogenin-1 3.10.130.10 125 33 91 2.38 2.60
2op2A00 87.88 Bos taurusPancreatic ribonuclease [EC:3.1.27.5]Ribonuclease pancreaticProtein binding 3.10.130.10 124 23 87 2.57 2.94
1yv4A00 85.39 Rana pipiensProtein P-30 3.10.130.10 103 24 80 3.45 4.29
2p7sA00 84.45 Rana pipiensAmphinase-2 3.10.130.10 107 25 82 3.58 4.32
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Displaying entries 1 to 4 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2vq8A00
HMQPEHVKERYKNFLNQHVGPDMSVQRCNSEIGPNNRKITLSGTDNGCKPVNTFILANKRLIKTVCGRAGSPQGNMVRSN
QPFPVVKCVLNNGERHPYCEYRGTRSTRYIVLKCEEGWPVHYHEDEVN
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2vq8A00
MGSSHHHHHHMQPEHVKERYKNFLNQHVGPDMSVQRCNSEIGPNNRKITLSGTDNGCKPVNTFILANKRLIKTVCGRAGS
PQGNMVRSNQPFPVVKCVLNNGERHPYCEYRGTRSTRYIVLKCEEGWPVHYHEDEVNVG
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 28 Jul 2008 02:56

Assigning to "3.10.130.10" based on similarity with "2j4tA00"

Flow stage update by auto on 28 Jul 2008 02:31

No in_process hits for Domain "2vq8A00" ready to be processed

Flow stage update by auto on 28 Jul 2008 02:31

NW result present for Domain "2vq8A00"

Flow stage update by auto on 26 Jul 2008 11:50

All required files are present for Domain "2vq8A00"

Flow stage update by auto on 26 Jul 2008 11:49

Beginning processing for Domain "2vq8A00"

Insertion by auto on 25 Jul 2008 23:24

Final ChopClose added based on similarity with "2vq9A"