CATH Domain: 2vhlA02 XML data for domain: 2vhlA02

Molscript image for 2vhlA02
2vhlA02
PDB coordinates for domain 2vhlA02

PDB 2vhl, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.20 Alpha-Beta Barrel
3.20.20 TIM Barrel
3.20.20.140 Metal-dependent hydrolases Gene3D
3.20.20.140.19
3.20.20.140.19.1
3.20.20.140.19.1.1
3.20.20.140.19.1.1.1
3.20.20.140.19.1.1.1.1

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Segment boundaries for domain 2vhlA02

Chopping figure for domain 2vhlA02
DomainStart PDB ResidueStop PDB Residue
2vhlA01 3 57
2vhlA01 359 394
2vhlA02 58 358

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 3.20.20.140.19.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1yrrA02 87.61 Amino sugar and nucleotide sugar metabolismEscherichia coli O157:H7N-acetylglucosamine-6-phosphate deacetylaseN-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] 3.20.20.140 289 30 94 3.97 4.19
3cjpA00 74.71 Predicted amidohodrolase (Dihydroorotase family)Clostridium acetobutylicum 3.20.20.140 260 9 70 3.26 4.63
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Displaying entries 1 to 2 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2vhlA02
GMIDIHIHGGYGADTMDASFSTLDIMSSRLPEEGTTSFLATTITQEHGNISQALVNAREWKAAEESSLLGAELLGIHLEG
PFVSPKRAGAQPKEWIRPSDVELFKKWQQEAGGLIKIVTLAPEEDQHFELIRHLKDESIIASMGHTDADSALLSDAAKAG
ASHMTHLYNAMSPFHHREPGVIGTALAHDGFVTELIADGIHSHPLAAKLAFLAKGSSKLILITDSMRAKGLKDGVYEFGG
QSVTVRGRTALLSDGTLAGSILKMNEGARHMREFTNCSWTDIANITSENAAKQLGIFDRKG
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2vhlA02
GMIDIHIHGGYGADTMDASFSTLDIMSSRLPEEGTTSFLATTITQEHGNISQALVNAREWKAAEESSLLGAELLGIHLEG
PFVSPKRAGAQPKEWIRPSDVELFKKWQQEAGGLIKIVTLAPEEDQHFELIRHLKDESIIASMGHTDADSALLSDAAKAG
ASHMTHLYNAMSPFHHREPGVIGTALAHDGFVTELIADGIHSHPLAAKLAFLAKGSSKLILITDSMRAKGLKDGVYEFGG
QSVTVRGRTALLSDGTLAGSILKMNEGARHMREFTNCSWTDIANITSENAAKQLGIFDRKG
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 08 Dec 2007 14:22

Assigning to "3.20.20.140" based on similarity with "1un7A02"

Flow stage update by auto on 08 Dec 2007 14:06

No in_process hits for Domain "2vhlA02" ready to be processed

Flow stage update by auto on 08 Dec 2007 14:06

NW result present for Domain "2vhlA02"

Flow stage update by auto on 08 Dec 2007 06:12

All required files are present for Domain "2vhlA02"

Flow stage update by auto on 07 Dec 2007 10:17

Beginning processing for Domain "2vhlA02"

Insertion by auto on 07 Dec 2007 10:05

Final ChopClose added based on similarity with "1un7A"