CATH Domain: 2vheA01 XML data for domain: 2vheA01

Molscript image for 2vheA01
2vheA01
PDB coordinates for domain 2vheA01

PDB 2vhe, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.20 Gene3D
3.40.50.20.12
3.40.50.20.12.1
3.40.50.20.12.1.1
3.40.50.20.12.1.1.1
3.40.50.20.12.1.1.1.1

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Segment boundaries for domain 2vheA01

Chopping figure for domain 2vheA01
DomainStart PDB ResidueStop PDB Residue
2vheA01 2 76
2vheA02 77 188

Structural Neighbourhood (22 entries)

There are 22 matching structural neighberhood comparisons for CATH ID 3.40.50.20.12.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 22 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1vkzA01 82.51 Thermotoga maritimaPhosphoribosylamine--glycine ligase [EC:6.3.4.13]Purine metabolismPhosphoribosylamine--glycine ligaseMetabolic pathways 3.40.50.20 77 13 80 3.09 3.84
2x5oA01 80.42 D-Glutamine and D-glutamate metabolismPeptidoglycan biosynthesisMetabolic pathwaysUDP-N-acetylmuramoylalanine--D-glutamate ligaseUDP-N-acetylmuramoylalanine-D-glutamate ligase activity 3.40.50.720 92 16 73 2.68 3.63
1pjqA01 78.86 Porphyrin and chlorophyll metabolismSalmonella enterica subsp. enterica serovar TyphimuriumSiroheme synthaseUroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]Metabolic pathways 3.40.50.720 112 9 66 3.22 4.87
3eagA01 78.08 UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.-]Neisseria meningitidis serogroup BUDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 3.40.50.720 88 17 78 3.43 4.37
2ho3A01 77.78 Oxidoreductase, Gfo/Idh/MocA familyStreptococcus pneumoniae 3.40.50.720 113 13 62 2.24 3.57
1p3dA01 77.63 D-Glutamine and D-glutamate metabolismUDP-N-acetylmuramate--L-alanine ligaseUDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]Haemophilus influenzaePeptidoglycan biosynthesis 3.40.50.720 87 13 78 3.73 4.77
2aefA01 77.52 Methanothermobacter thermautotrophicus str. Delta HCalcium-gated potassium channel mthK 3.40.50.720 115 13 60 2.95 4.92
1mioB04 76.62 Nitrogenase molybdenum-iron protein beta chainClostridium pasteurianum 3.40.50.1980 98 8 66 2.74 4.13
1j6uA01 75.95 D-Glutamine and D-glutamate metabolismThermotoga maritimaUDP-N-acetylmuramate--L-alanine ligaseUDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]Peptidoglycan biosynthesis 3.40.50.720 85 10 78 3.64 4.62
1oi7A01 75.65 Succinyl-CoA ligase [ADP-forming] subunit alphaThermus thermophilus 3.40.50.720 122 13 60 2.50 4.12
1z0sA01 75.46 Archaeoglobus fulgidusProbable inorganic polyphosphate/ATP-NAD kinaseNAD+ kinase [EC:2.7.1.23]Nicotinate and nicotinamide metabolismMetabolic pathways 3.40.50.10330 123 10 49 2.22 4.48
2gfqA02 75.31 Hypothetical proteinPyrococcus horikoshiiD-tyrosyl-tRNA(Tyr) deacylase 3.40.50.10700 87 8 82 3.90 4.71
1xeaA01 75.00 Vibrio choleraeOxidoreductase, Gfo/Idh/MocA familyVirulence factor 3.40.50.720 117 9 59 2.57 4.30
1ydwA01 74.93 Arabidopsis thalianaUncharacterized oxidoreductase At4g09670 3.40.50.720 124 9 57 2.25 3.93
1m1nB03 74.68 Nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]Nitrogen metabolismAzotobacter vinelandiiNitrogenase molybdenum-iron protein beta chainMetabolic pathways 3.40.50.1980 106 6 60 2.73 4.52
1efdN01 74.33 ABC transportersIron(3+)-hydroxamate-binding protein fhuDIron complex transport system substrate-binding proteinEscherichia coli K-12 3.40.50.1980 91 5 71 3.42 4.79
3ff4A00 74.31 Cytophaga hutchinsonii ATCC 33406Putative uncharacterized protein 3.40.50.720 119 18 59 2.93 4.91
2p2sA01 73.97 Pectobacterium atrosepticumPutative oxidoreductase 3.40.50.720 130 8 54 2.60 4.76
1dljA02 73.17 Amino sugar and nucleotide sugar metabolismStarch and sucrose metabolismPentose and glucuronate interconversionsAscorbate and aldarate metabolismMetabolic pathways 3.40.50.1870 108 6 61 3.01 4.93
2ielA00 73.16 Thermus thermophilus HB27Putative uncharacterized protein 3.40.50.620 132 2 54 2.61 4.79
2pfsA01 72.72 Universal stress protein (Usp)Nitrosomonas europaeaUniversal stress protein A 3.40.50.620 114 2 60 2.96 4.89
2dt5A02 72.23 Thermus thermophilus HB8Redox-sensing transcriptional repressor rexAT-rich DNA-binding protein 3.40.50.720 138 17 52 2.55 4.82
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Displaying entries 1 to 22 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2vheA01
ARTEKIYIYGASGHGLVCEDVAKNMGYKECIFLDDFKGMKFESTLPKYDFFIAIGNNEIRKKIYQKISENGFKIV
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2vheA01
ARTEKIYIYGASGHGLVCEDVAKNMGYKECIFLDDFKGMKFESTLPKYDFFIAIGNNEIRKKIYQKISENGFKIV
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 21 Oct 2008 14:25

Assigning to "3.40.50.20" based on similarity with "2npoA01"

Flow stage update by auto on 21 Oct 2008 14:07

No in_process hits for Domain "2vheA01" ready to be processed

Flow stage update by auto on 21 Oct 2008 14:07

NW result present for Domain "2vheA01"

Flow stage update by auto on 21 Oct 2008 08:34

All required files are present for Domain "2vheA01"

Flow stage update by auto on 20 Oct 2008 18:49

Beginning processing for Domain "2vheA01"

Insertion by auto on 20 Oct 2008 17:12

Final ChopClose added based on similarity with "2npoA"