CATH Domain: 2vglB00 XML data for domain: 2vglB00

Molscript image for 2vglB00
2vglB00
PDB coordinates for domain 2vglB00

PDB 2vgl, Chain B, Domain 0

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.25 Alpha Horseshoe
1.25.10 Leucine-rich Repeat Variant
1.25.10.10 Leucine-rich Repeat Variant Gene3D
1.25.10.10.6
1.25.10.10.6.1
1.25.10.10.6.1.1
1.25.10.10.6.1.1.1
1.25.10.10.6.1.1.1.1

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Segment boundaries for domain 2vglB00

Chopping figure for domain 2vglB00
DomainStart PDB ResidueStop PDB Residue
2vglB00 4 582

Structural Neighbourhood (0 entries)

Sorry, we could not find any non-redundant representatives with similar structural scores to this domain in CATH.


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Domain ATOM Sequence 

>pdb|2vglB00
SKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDM
AIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLD
SLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDREAQSICER
VTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKV
FFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKV
NYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNADELLESFLEGFHDESTQVQLT
LLTAIVKLFLKKPSETQELVQQVLSLATQDSDNPDLRDRGYIYWRLLSTDPVTAKEVVLSEKPLISEETDLIEPTLLDEL
ICHIGSLASVYHKPPNAFV
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2vglB00
MTDSKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQ
PDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQG
FLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDREAQSI
CERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQE
IKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ
TKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNADELLESFLEGFHDESTQV
QLTLLTAIVKLFLKKPSETQELVQQVLSLATQDSDNPDLRDRGYIYWRLLSTDPVTAKEVVLSEKPLISEETDLIEPTLL
DELICHIGSLASVYHKPPNAFVEGSHGIHRK
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 29 Dec 2007 23:14

Assigning to "1.25.10.10" based on similarity with "1gw5B00"

Flow stage update by auto on 29 Dec 2007 23:03

No in_process hits for Domain "2vglB00" ready to be processed

Flow stage update by auto on 29 Dec 2007 23:03

NW result present for Domain "2vglB00"

Flow stage update by auto on 29 Dec 2007 08:06

All required files are present for Domain "2vglB00"

Flow stage update by auto on 28 Dec 2007 11:49

Beginning processing for Domain "2vglB00"

Insertion by auto on 28 Dec 2007 11:06

Final ChopClose added based on similarity with "1gw5B"