Domain assigned by auto on 20 Dec 2008 17:35
Assigning to "2.160.20.20" based on similarity with "2vfpA00"
CATH Domain: 2vfmA00
2vfmA00
PDB 2vfm, Chain A, Domain 0
| CATH Code | Level Description | Links |
|---|---|---|
 2
| Mainly Beta | |
 2.160
| 3 Solenoid | |
 2.160.20
| Pectate Lyase C-like | |
 2.160.20.20
| Gene3D | |
 2.160.20.20.1
| ||
 2.160.20.20.1.1
| ||
 2.160.20.20.1.1.1
| ||
 2.160.20.20.1.1.1.1
| ||
 2.160.20.20.1.1.1.1.1
|
Structural Neighbourhood (0 entries)
Sorry, we could not find any non-redundant representatives with similar structural scores to this domain in CATH.
Domain ATOM Sequence
>pdb|2vfmA00 QYSIEADKKFKYSVKLSDYPTLQDAASAAVDGLLIDRDYNFYGGETVDFGGKVLTIECKAKFIGDGNLIFTKLGKGSRIA GVFMESTTTPWVIKPWTDDNQWLTDAAAVVATLKQSKTDGYQPTVSDYVKFPGIETLLPPNAKGQNITSTLEIRECIGVE VHRASGLMAGFLFRGCHFCKMVDANNPSGGKDGIITFENLSGDWGKGNYVIGGRTSYGSVSSAQFLRNNGGFERDGGVIG FTSYRAGESGVKTWQGTVGSTTSRNYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNL LVRGALGVGFGMDGKGMYVSNITVEDCAGSGAYLLTHESVFTNIAIIDTNTKDFQANQIYISGACRVNGLRLIGIRSTDG QSLTIDAPNSTVSGITGMVDPSRINVANLAEEGLGNIRANSFGYDSAAIKLRIHKLSKTLDSGALYSHINGGAGSGSAYT QLTAISGSTPDAVSLKVNHKDCRGAEIPFVPDIASDDFIKDSSCFLPYWENNSTSLKALVKKPNGELVRLTLATL
Domain COMBS Sequence
>pdb|2vfmA00 MDPDQYSIEADKKFKYSVKLSDYPTLQDAASAAVDGLLIDRDYNFYGGETVDFGGKVLTIECKAKFIGDGNLIFTKLGKG SRIAGVFMESTTTPWVIKPWTDDNQWLTDAAAVVATLKQSKTDGYQPTVSDYVKFPGIETLLPPNAKGQNITSTLEIREC IGVEVHRASGLMAGFLFRGCHFCKMVDANNPSGGKDGIITFENLSGDWGKGNYVIGGRTSYGSVSSAQFLRNNGGFERDG GVIGFTSYRAGESGVKTWQGTVGSTTSRNYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHL IDNLLVRGALGVGFGMDGKGMYVSNITVEDCAGSGAYLLTHESVFTNIAIIDTNTKDFQANQIYISGACRVNGLRLIGIR STDGQSLTIDAPNSTVSGITGMVDPSRINVANLAEEGLGNIRANSFGYDSAAIKLRIHKLSKTLDSGALYSHINGGAGSG SAYTQLTAISGSTPDAVSLKVNHKDCRGAEIPFVPDIASDDFIKDSSCFLPYWENNSTSLKALVKKPNGELVRLTLATL
Domain History Events (8)
Flow stage update by auto on 20 Dec 2008 17:34
No in_process hits for Domain "2vfmA00" ready to be processed
Update comment by auto on 20 Dec 2008 14:33
Domain "2vfmA00" hits Domain "2vfpA00" (99.8211091234347% over 100%) which is currently in process
Flow stage update by auto on 20 Dec 2008 14:14
Domain "2vfmA00" hits Domain "2vfpA00" (99.8211091234347% over 100%) which is currently in process
Flow stage update by auto on 20 Dec 2008 14:14
NW result present for Domain "2vfmA00"
Flow stage update by auto on 20 Dec 2008 11:17
All required files are present for Domain "2vfmA00"
Flow stage update by auto on 19 Dec 2008 16:38
Beginning processing for Domain "2vfmA00"
Insertion by auto on 19 Dec 2008 14:16
Final ChopClose added based on similarity with "1tspA"
