CATH Domain: 2vb1A00 XML data for domain: 2vb1A00

Molscript image for 2vb1A00
2vb1A00
PDB coordinates for domain 2vb1A00

PDB 2vb1, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.530 Lysozyme
1.10.530.10 Gene3D
1.10.530.10.1
1.10.530.10.1.1
1.10.530.10.1.1.1
1.10.530.10.1.1.1.1
1.10.530.10.1.1.1.1.1

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Segment boundaries for domain 2vb1A00

Chopping figure for domain 2vb1A00
DomainStart PDB ResidueStop PDB Residue
2vb1A00 1 129

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 1.10.530.10.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3cb7A00 90.65 Lys-rich lysozyme 2Musca domestica 1.10.530.10 126 36 93 1.86 1.98
1b9oA00 90.21 Galactose metabolismAlpha-lactalbumin [EC:2.4.1.22]Defense response to bacteriumSignal transductionExtracellular space 1.10.530.10 123 36 95 1.79 1.88
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Displaying entries 1 to 2 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2vb1A00
KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC
SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2vb1A00
KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC
SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 01 Dec 2007 14:14

Assigning to "1.10.530.10" based on similarity with "4lyoA00"

Flow stage update by auto on 01 Dec 2007 14:04

No in_process hits for Domain "2vb1A00" ready to be processed

Flow stage update by auto on 01 Dec 2007 14:04

NW result present for Domain "2vb1A00"

Flow stage update by auto on 24 Nov 2007 14:39

All required files are present for Domain "2vb1A00"

Flow stage update by auto on 23 Nov 2007 14:01

Beginning processing for Domain "2vb1A00"

Insertion by auto on 23 Nov 2007 12:19

Final ChopClose added based on similarity with "193lA"