CATH Domain: 2v95A02 XML data for domain: 2v95A02

Molscript image for 2v95A02
2v95A02
PDB coordinates for domain 2v95A02

PDB 2v95, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.30 Roll
2.30.39 Alpha-1-antitrypsin; domain 1
2.30.39.10 Alpha-1-antitrypsin, domain 1 Gene3D
2.30.39.10.3
2.30.39.10.3.1
2.30.39.10.3.1.1
2.30.39.10.3.1.1.1
2.30.39.10.3.1.1.1.1

[top]
Segment boundaries for domain 2v95A02

Chopping figure for domain 2v95A02
DomainStart PDB ResidueStop PDB Residue
2v95A01 7 176
2v95A01 272 324
2v95A02 177 271
2v95A02 340 373

Structural Neighbourhood (6 entries)

There are 6 matching structural neighberhood comparisons for CATH ID 2.30.39.10.3.1.1.1.1 (SIMAX score < 5)

[1]
Displaying entries 1 to 6 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1jmoA02 90.34 Heparin cofactor IIHomo sapiensHeparin cofactor 2Complement and coagulation cascades 2.30.39.10 150 30 86 3.68 4.28
1hp7A01 87.60 Alpha-1-antitrypsinProtease bindingAlpha-1-antitrypsinHomo sapiensExtracellular space 2.30.39.10 95 34 73 3.04 4.13
1imvA01 86.50 Negative regulation of angiogenesisHomo sapiensPigment epithelium-derived factorCell proliferationPositive regulation of neurogenesis 2.30.39.10 169 30 76 1.44 1.89
2rivA02 85.36 Thyroxine-binding globulinHomo sapiensExtracellular spaceSerine-type endopeptidase inhibitor activity 2.30.39.10 87 41 67 3.17 4.70
1k9oI02 85.17 Manduca sextaAlaserpinProtein binding 2.30.39.10 161 22 78 3.16 4.01
2h4pA02 84.58 Gallus gallusHeterochromatin-associated protein MENT 2.30.39.10 102 19 72 1.83 2.51
[1]
Displaying entries 1 to 6 (page 1 of 1)


[top]
Domain ATOM Sequence 

>pdb|2v95A02
WELPFSPENTREEDFYVNETSTVKVPMMVQSGSIGYFRDSVFPCQLIQMDYVGNGTAFFILPDQGQMDTVIAALSRDTID
RWGKLMTPRQVNLYIRSEPLDIKFNKPFILLLFDKFTWSSLMMSQVVNP
BLAST against CATH

[top]
Domain COMBS Sequence 

>pdb|2v95A02
WELPFSPENTREEDFYVNETSTVKVPMMVQSGSIGYFRDSVFPCQLIQMDYVGNGTAFFILPDQGQMDTVIAALSRDTID
RWGKLMTPRQVNLYIRSEPLDIKFNKPFILLLFDKFTWSSLMMSQVVNP
BLAST against CATH

[top]
Domain History Events (6)

Domain assigned by auto on 01 Dec 2007 14:13

Assigning to "2.30.39.10" based on similarity with "2v6dA02"

Flow stage update by auto on 01 Dec 2007 14:04

No in_process hits for Domain "2v95A02" ready to be processed

Flow stage update by auto on 01 Dec 2007 14:04

NW result present for Domain "2v95A02"

Flow stage update by auto on 24 Nov 2007 14:39

All required files are present for Domain "2v95A02"

Flow stage update by auto on 24 Nov 2007 02:37

Beginning processing for Domain "2v95A02"

Insertion by auto on 23 Nov 2007 18:29

Final ChopClose added based on similarity with "2v6dA"