CATH Domain: 2tpsB00 XML data for domain: 2tpsB00

Molscript image for 2tpsB00
2tpsB00
PDB coordinates for domain 2tpsB00

PDB 2tps, Chain B, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.20 Alpha-Beta Barrel
3.20.20 TIM Barrel
3.20.20.70 Aldolase class I Gene3D
3.20.20.70.20
3.20.20.70.20.1
3.20.20.70.20.1.1
3.20.20.70.20.1.1.1
3.20.20.70.20.1.1.1.1

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Segment boundaries for domain 2tpsB00

Chopping figure for domain 2tpsB00
DomainStart PDB ResidueStop PDB Residue
2tpsB00 9 235

Structural Neighbourhood (28 entries)

There are 28 matching structural neighberhood comparisons for CATH ID 3.20.20.70.20.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 28 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1xi3A00 89.90 Pyrococcus furiosusThiamine metabolismThiamine-phosphate pyrophosphorylaseThiamine-phosphate pyrophosphorylase [EC:2.5.1.3]Metabolic pathways 3.20.20.70 202 33 89 1.48 1.66
1wa3D00 82.63 Thermotoga maritimaArginine and proline metabolism2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.16]Glyoxylate and dicarboxylate metabolism 3.20.20.70 203 17 86 2.70 3.13
3f4wA00 81.37 Pentose and glucuronate interconversionsMethane metabolismPutative hexulose 6 phosphate synthaseSalmonella enterica subsp. enterica serovar Typhimurium3-hexulose-6-phosphate synthase [EC:4.1.2.43] 3.20.20.70 211 14 86 3.19 3.70
1twdB00 80.97 Shigella flexneriCopper homeostasis proteinCopper homeostasis protein cutC 3.20.20.380 226 12 81 3.76 4.62
1q6oB00 80.75 Ascorbate and aldarate metabolism3-keto-L-gulonate-6-phosphate decarboxylase ulaDMagnesium ion binding3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]3-dehydro-L-gulonate-6-phosphate decarboxylase activity 3.20.20.70 215 10 86 3.30 3.82
3ceuA00 80.59 Bacteroides thetaiotaomicronThiamine phosphate pyrophosphorylase 3.20.20.70 193 14 80 3.17 3.91
2yw3E00 80.38 Arginine and proline metabolism2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.16]Glyoxylate and dicarboxylate metabolismMetabolic pathwaysThermus thermophilus HB8 3.20.20.70 198 12 83 2.90 3.49
1w0mA00 80.16 Thermoproteus tenaxTriosephosphate isomerase 3.20.20.70 225 12 86 3.94 4.57
1nsjA00 79.69 Thermotoga maritimaN-(5'-phosphoribosyl)anthranilate isomerasePhenylalanine, tyrosine and tryptophan biosynthesisPhosphoribosylanthranilate isomerase [EC:5.3.1.24]Metabolic pathways 3.20.20.70 205 12 82 3.29 4.00
1dvjA00 79.66 Pyrimidine metabolismMethanothermobacter thermautotrophicus str. Delta HOrotidine 5'-phosphate decarboxylaseOrotidine-5'-phosphate decarboxylase [EC:4.1.1.23]Metabolic pathways 3.20.20.70 239 10 79 3.31 4.16
1wbhB00 79.62 Arginine and proline metabolismGlyoxylate and dicarboxylate metabolismMetabolic pathwaysPentose and glucuronate interconversionsPentose phosphate pathway 3.20.20.70 214 13 88 3.80 4.32
2fliC00 79.31 Pentose phosphate pathwayPentose and glucuronate interconversionsMetabolic pathwaysRibulose-phosphate 3-epimerase [EC:5.1.3.1]Streptococcus pyogenes serotype M1 3.20.20.70 219 13 86 3.34 3.87
3ldvA00 79.30 Pyrimidine metabolismMetabolic pathwaysVibrio choleraeOrotidine 5'-phosphate decarboxylaseOrotidine-5'-phosphate decarboxylase [EC:4.1.1.23] 3.20.20.70 231 11 78 3.16 4.03
1vc4A00 79.24 Indole-3-glycerol phosphate synthase [EC:4.1.1.48]Phenylalanine, tyrosine and tryptophan biosynthesisIndole-3-glycerol phosphate synthaseMetabolic pathwaysThermus thermophilus 3.20.20.70 254 16 78 3.11 3.95
1piiA02 79.10 Phenylalanine, tyrosine and tryptophan biosynthesisTryptophan biosynthesis protein trpCFIndole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]Phosphoribosylanthranilate isomerase activityIndole-3-glycerol-phosphate synthase activity 3.20.20.70 190 13 78 3.70 4.72
1a53A00 78.62 Indole-3-glycerol phosphate synthase [EC:4.1.1.48]Phenylalanine, tyrosine and tryptophan biosynthesisSulfolobus solfataricusIndole-3-glycerol phosphate synthaseMetabolic pathways 3.20.20.70 247 11 80 3.38 4.22
1ub3A00 78.59 Thermus thermophilus HB8Deoxyribose-phosphate aldolasePentose phosphate pathwayDeoxyribose-phosphate aldolase [EC:4.1.2.4] 3.20.20.70 211 12 76 3.31 4.30
1vhcF00 78.41 Arginine and proline metabolism2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.16]Glyoxylate and dicarboxylate metabolismMetabolic pathwaysHaemophilus influenzae 3.20.20.70 209 14 85 3.35 3.90
1i4nA00 78.00 Thermotoga maritimaIndole-3-glycerol phosphate synthase 3.20.20.70 251 14 82 3.82 4.63
1w8sE00 77.62 Thermoproteus tenaxFructose-bisphosphate aldolase class 1 3.20.20.70 252 17 74 3.19 4.30
1piiA01 76.94 Phenylalanine, tyrosine and tryptophan biosynthesisTryptophan biosynthesis protein trpCFIndole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]Indole-3-glycerol-phosphate synthase activityPhosphoribosylanthranilate isomerase activity 3.20.20.70 261 13 78 3.81 4.85
2f6uA00 75.78 Geranylgeranylglyceryl phosphate synthaseArchaeoglobus fulgidus 3.20.20.390 231 7 80 3.71 4.61
2w79A00 75.59 Histidine metabolismMetabolic pathwaysThermotoga maritima1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerasePhosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] 3.20.20.70 241 12 79 3.74 4.69
1vkfA00 75.29 Thermotoga maritimaGlycerol uptake operon antiterminatorGlycerol uptake operon antiterminator-related protein 3.20.20.400 168 11 66 3.07 4.59
3cu2A00 75.01 Pentose and glucuronate interconversionsPentose phosphate pathwayHaemophilus somnus 129PTRibulose-5-phosphate 3-epimeraseRibulose-phosphate 3-epimerase [EC:5.1.3.1] 3.20.20.70 232 11 84 3.58 4.26
1x1oA02 74.74 Thermus thermophilus HB8Nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]Nicotinate and nicotinamide metabolismNicotinate-nucleotide pyrophosphorylase [carboxylating]Metabolic pathways 3.20.20.70 143 17 58 2.94 5.00
3lerC00 74.63 Dihydrodipicolinate synthase [EC:4.2.1.52]Dihydrodipicolinate synthaseCampylobacter jejuniLysine biosynthesisMetabolic pathways 3.20.20.70 289 8 63 3.16 4.96
1x7fA01 74.16 Outer surface proteinBacillus cereus ATCC 14579 3.20.20.70 228 7 80 3.93 4.90
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Displaying entries 1 to 28 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2tpsB00
HHGIRMTRISREMMKELLSVYFIMGSNNTKADPVTVVQKALKGGATLYQFREKGGDALTGEARIKFAEKAQAACREAGVP
FIVNDDVELALNLKADGIHIGQEDANAKEVRAAIGDMILGVSAHTMSEVKQAEEDGADYVGLGPIYPTETKKDTRAVQGV
SLIEAVRRQGISIPIVGIGGITIDNAAPVIQAGADGVSMISAISQAEDPESAARKFREEIQTYKTGR
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2tpsB00
HHGIRMTRISREMMKELLSVYFIMGSNNTKADPVTVVQKALKGGATLYQFREKGGDALTGEARIKFAEKAQAACREAGVP
FIVNDDVELALNLKADGIHIGQEDANAKEVRAAIGDMILGVSAHTMSEVKQAEEDGADYVGLGPIYPTETKKDTRAVQGV
SLIEAVRRQGISIPIVGIGGITIDNAAPVIQAGADGVSMISAISQAEDPESAARKFREEIQTYKTGR
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:54

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:54

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:19

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"