CATH Domain: 2rspA00 XML data for domain: 2rspA00

Molscript image for 2rspA00
2rspA00
PDB coordinates for domain 2rspA00

PDB 2rsp, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.40 Beta Barrel
2.40.70 Cathepsin D, subunit A; domain 1
2.40.70.10 Acid Proteases Gene3D
2.40.70.10.17
2.40.70.10.17.1
2.40.70.10.17.1.1
2.40.70.10.17.1.1.1
2.40.70.10.17.1.1.1.1

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Segment boundaries for domain 2rspA00

Chopping figure for domain 2rspA00
DomainStart PDB ResidueStop PDB Residue
2rspA00 1 124

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 2.40.70.10.17.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1fmbA00 87.57 Equine infectious anemia virus (clone CL22)Pol polyprotein 2.40.70.10 104 22 81 1.74 2.13
1nsoA00 75.00 ProteaseMason-Pfizer monkey virus 2.40.70.10 107 22 81 3.70 4.53
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Displaying entries 1 to 2 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2rspA00
LAMTMEHKDRPLVRVILTNTGSHPVKQRSVYITALLDSGADITIISEEDWPTDWPVMEAAGIPMRKSRDMIELGVINRDG
SLERPLLLFPAVAMVRGSILGRDCLQGLGLRLTNL
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2rspA00
LAMTMEHKDRPLVRVILTNTGSHPVKQRSVYITALLDSGADITIISEEDWPTDWPVMEAANPQIHGIGGGIPMRKSRDMI
ELGVINRDGSLERPLLLFPAVAMVRGSILGRDCLQGLGLRLTNL
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:32

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:32

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 14:53

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"