CATH Domain: 2rivA02 XML data for domain: 2rivA02

Molscript image for 2rivA02
2rivA02
PDB coordinates for domain 2rivA02

PDB 2riv, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.30 Roll
2.30.39 Alpha-1-antitrypsin; domain 1
2.30.39.10 Alpha-1-antitrypsin, domain 1 Gene3D
2.30.39.10.8
2.30.39.10.8.1
2.30.39.10.8.1.1
2.30.39.10.8.1.1.1
2.30.39.10.8.1.1.1.1

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Segment boundaries for domain 2rivA02

Chopping figure for domain 2rivA02
DomainStart PDB ResidueStop PDB Residue
2rivA01 17 190
2rivA01 287 355
2rivA02 191 286

Structural Neighbourhood (9 entries)

There are 9 matching structural neighberhood comparisons for CATH ID 2.30.39.10.8.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 9 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3f02B02 87.77 Peripheral nervous system developmentNeuroserpinHomo sapiensCentral nervous system developmentSerine-type endopeptidase inhibitor activity 2.30.39.10 99 25 84 1.64 1.93
2h4pA02 86.74 Gallus gallusHeterochromatin-associated protein MENT 2.30.39.10 102 22 84 1.74 2.06
1hp7A01 86.68 Alpha-1-antitrypsinProtease bindingAlpha-1-antitrypsinHomo sapiensExtracellular space 2.30.39.10 95 28 88 4.05 4.58
1mtpA02 86.64 Proteinase inhibitor I4, serpinThermobifida fusca YX 2.30.39.10 91 17 91 2.17 2.38
1sekA02 84.46 Manduca sextaSerine protease inhibitor 2.30.39.10 117 22 74 1.57 2.11
1jmoA02 82.10 Heparin cofactor IIHomo sapiensHeparin cofactor 2Complement and coagulation cascades 2.30.39.10 150 22 58 1.27 2.19
2b5tI02 80.25 Antithrombin IIIProtease bindingHomo sapiensAntithrombin-IIIExtracellular space 2.30.39.10 146 20 58 2.08 3.53
1k9oI02 77.91 Manduca sextaAlaserpinProtein binding 2.30.39.10 161 21 54 1.61 2.98
1imvA01 76.83 Negative regulation of angiogenesisHomo sapiensPigment epithelium-derived factorCell proliferationPositive regulation of neurogenesis 2.30.39.10 169 28 51 1.89 3.67
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Displaying entries 1 to 9 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2rivA02
ANPFDPSKTEDSSSFLIDKTTTVQVPMMHQMEQYYHLVDMELNCTVLQMDYSKNALALFVLPKEGQMESVEAAMSSKTLK
KWNRLLQKGWVDLFVP
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2rivA02
ANPFDPSKTEDSSSFLIDKTTTVQVPMMHQMEQYYHLVDMELNCTVLQMDYSKNALALFVLPKEGQMESVEAAMSSKTLK
KWNRLLQKGWVDLFVP
BLAST against CATH

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Domain History Events (8)

Domain assigned by auto on 18 Oct 2008 14:41

Assigning to "2.30.39.10" based on similarity with "2riwA02"

Flow stage update by auto on 18 Oct 2008 14:40

No in_process hits for Domain "2rivA02" ready to be processed

Update comment by auto on 18 Oct 2008 14:28

Domain "2rivA02" hits Domain "2riwA02" (100% over 100%) which is currently in process

Flow stage update by auto on 18 Oct 2008 14:09

Domain "2rivA02" hits Domain "2riwA02" (100% over 100%) which is currently in process

Flow stage update by auto on 18 Oct 2008 14:09

NW result present for Domain "2rivA02"

Flow stage update by auto on 18 Oct 2008 11:11

All required files are present for Domain "2rivA02"

Flow stage update by auto on 17 Oct 2008 15:08

Beginning processing for Domain "2rivA02"

Insertion by auto on 17 Oct 2008 14:07

Final ChopClose added based on similarity with "2riwA"