CATH Domain: 2rc5A02 XML data for domain: 2rc5A02

Molscript image for 2rc5A02
2rc5A02
PDB coordinates for domain 2rc5A02

PDB 2rc5, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.80 Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module Gene3D
3.40.50.80.9
3.40.50.80.9.1
3.40.50.80.9.1.1
3.40.50.80.9.1.1.1
3.40.50.80.9.1.1.1.1

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Segment boundaries for domain 2rc5A02

Chopping figure for domain 2rc5A02
DomainStart PDB ResidueStop PDB Residue
2rc5A01 7 153
2rc5A02 154 314

Structural Neighbourhood (7 entries)

There are 7 matching structural neighberhood comparisons for CATH ID 3.40.50.80.9.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 7 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1qfjA02 83.59 Porphyrin and chlorophyll metabolismAquacobalamin reductase / NAD(P)H-flavin reductase [EC:1.16.1.3 1.5.1.29]NAD(P)H-flavin reductaseEscherichia coli K-12 3.40.50.80 135 17 81 3.89 4.78
1ep3B02 81.96 Lactococcus lactis subsp. cremoris MG1363Dihydroorotate dehydrogenase electron transfer subunitProtein bindingDihydroorotate dehydrogenase electron transfer subunit 3.40.50.80 117 17 72 2.73 3.76
2piaA02 80.61 Burkholderia cepaciaPhthalate dioxygenase reductase 3.40.50.80 121 16 73 2.78 3.76
2gpjA02 78.77 Siderophore-interacting proteinShewanella putrefaciens CN-32 3.40.50.80 142 8 73 3.59 4.86
2aefA01 77.01 Methanothermobacter thermautotrophicus str. Delta HCalcium-gated potassium channel mthK 3.40.50.720 115 6 59 2.63 4.46
1lssA00 75.69 Trk system potassium uptake protein TrkATrk system potassium uptake protein trkA homologMethanocaldococcus jannaschii 3.40.50.720 132 5 59 2.73 4.58
2c82A01 74.16 Terpenoid backbone biosynthesisMetabolic pathways1-deoxy-D-xylulose 5-phosphate reductoisomerase1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]Mycobacterium tuberculosis 3.40.50.720 141 7 66 3.16 4.75
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Displaying entries 1 to 7 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2rc5A02
GKKFLLPNTDFSGDIMFLATGTGIAPFIGMSEELLEHKLIKFTGNITLVYGAPYSDELVMMDYLKGLESKHKNFKLITAI
SREEKNSFDGGRMYISHRVREQAEAVKKILNGGGRFYICGGPKGMEKGVIEEIQKISGNTGTYEEFKHHLEGAHQLFVET
Y
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2rc5A02
GKKFLLPNTDFSGDIMFLATGTGIAPFIGMSEELLEHKLIKFTGNITLVYGAPYSDELVMMDYLKGLESKHKNFKLITAI
SREEKNSFDGGRMYISHRVREQAEAVKKILNGGGRFYICGGPKGMEKGVIEEIQKISGNTGTYEEFKHHLEGAHQLFVET
Y
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 29 Mar 2008 17:24

Assigning to "3.40.50.80" based on similarity with "1ewyA02"

Flow stage update by auto on 29 Mar 2008 17:08

No in_process hits for Domain "2rc5A02" ready to be processed

Flow stage update by auto on 29 Mar 2008 17:07

NW result present for Domain "2rc5A02"

Flow stage update by auto on 29 Mar 2008 11:05

All required files are present for Domain "2rc5A02"

Flow stage update by auto on 28 Mar 2008 11:14

Beginning processing for Domain "2rc5A02"

Insertion by auto on 28 Mar 2008 11:07

Final ChopClose added based on similarity with "1fnbA"