CATH Domain: 2r8oA02 XML data for domain: 2r8oA02

Molscript image for 2r8oA02
2r8oA02
PDB coordinates for domain 2r8oA02

PDB 2r8o, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.970 Gene3D
3.40.50.970.2
3.40.50.970.2.1
3.40.50.970.2.1.1
3.40.50.970.2.1.1.1
3.40.50.970.2.1.1.1.1

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Segment boundaries for domain 2r8oA02

Chopping figure for domain 2r8oA02
DomainStart PDB ResidueStop PDB Residue
2r8oA01 2 326
2r8oA02 327 537
2r8oA03 538 663

Structural Neighbourhood (4 entries)

There are 4 matching structural neighberhood comparisons for CATH ID 3.40.50.970.2.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 4 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1l8aA02 84.96 Citrate cycle (TCA cycle)Pyruvate metabolismMetabolic pathwaysValine, leucine and isoleucine biosynthesisButanoate metabolism 3.40.50.970 218 16 89 1.99 2.21
2ozlB01 82.35 Pyruvate dehydrogenase (acetyl-transferring) activityPyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]Citrate cycle (TCA cycle)Pyruvate dehydrogenase E1 component subunit beta, mitochondrialTricarboxylic acid cycle 3.40.50.970 193 12 81 3.35 4.09
2bfdB01 81.53 Mitochondrial alpha-ketoglutarate dehydrogenase complexCarboxy-lyase activityValine, leucine and isoleucine degradationMetabolic pathwaysBranched chain family amino acid catabolic process 3.40.50.970 197 11 82 3.58 4.35
1t9bB01 79.32 Acetolactate synthase I/II/III large subunit [EC:2.2.1.6]Metabolic pathwaysValine, leucine and isoleucine biosynthesisButanoate metabolismFlavin adenine dinucleotide binding 3.40.50.970 185 8 80 3.87 4.81
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Displaying entries 1 to 4 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2r8oA02
RRMKGEMPSDFDAKAKEFIAKLQANPAKIASRKASQNAIEAFGPLLPEFLGGSADLAPSNLTLWSGSKAINEDAAGNYIH
YGVREFGMTAIANGISLHGGFLPYTSTFLMFVEYARNAVRMAALMKQRQVMVYTHDSIGLGEDGPTHQPVEQVASLRVTP
NMSTWRPCDQVESAVAWKYGVERQDGPTALILSRQNLAQQERTEEQLANIA
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2r8oA02
RRMKGEMPSDFDAKAKEFIAKLQANPAKIASRKASQNAIEAFGPLLPEFLGGSADLAPSNLTLWSGSKAINEDAAGNYIH
YGVREFGMTAIANGISLHGGFLPYTSTFLMFVEYARNAVRMAALMKQRQVMVYTHDSIGLGEDGPTHQPVEQVASLRVTP
NMSTWRPCDQVESAVAWKYGVERQDGPTALILSRQNLAQQERTEEQLANIA
BLAST against CATH

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Domain History Events (8)

Domain assigned by auto on 15 Dec 2007 18:13

Assigning to "3.40.50.970" based on similarity with "2r8pA02"

Flow stage update by auto on 15 Dec 2007 18:12

No in_process hits for Domain "2r8oA02" ready to be processed

Update comment by auto on 15 Dec 2007 14:29

Domain "2r8oA02" hits Domain "2r8pA02" (100% over 100%) which is currently in process

Flow stage update by auto on 15 Dec 2007 14:08

Domain "2r8oA02" hits Domain "2r8pA02" (100% over 100%) which is currently in process

Flow stage update by auto on 15 Dec 2007 14:08

NW result present for Domain "2r8oA02"

Flow stage update by auto on 15 Dec 2007 10:05

All required files are present for Domain "2r8oA02"

Flow stage update by auto on 14 Dec 2007 14:31

Beginning processing for Domain "2r8oA02"

Insertion by auto on 14 Dec 2007 14:13

Final ChopClose added based on similarity with "2r5nA"