CATH Domain: 2r85A02 XML data for domain: 2r85A02

Molscript image for 2r85A02
2r85A02
PDB coordinates for domain 2r85A02

PDB 2r85, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.30 2-Layer Sandwich
3.30.470 D-amino Acid Aminotransferase; Chain A, domain 1
3.30.470.20 ATP-grasp fold, B domain Gene3D
3.30.470.20.3
3.30.470.20.3.1
3.30.470.20.3.1.1
3.30.470.20.3.1.1.1
3.30.470.20.3.1.1.1.1

Segment boundaries for domain 2r85A02

Chopping figure for domain 2r85A02
DomainStart PDB ResidueStop PDB Residue
2r85A01 1 87
2r85A02 88 115
2r85A02 178 334
2r85A03 116 177

Structural Neighbourhood (1 entries)

There are 1 matching structural neighberhood comparisons for CATH ID 3.30.470.20.3.1.1.1.1 (SIMAX score < 5)

Displaying entries 1 to 1 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1iowA02 74.65 D-Alanine metabolismPeptidoglycan biosynthesisD-alanine--D-alanine ligase BD-alanine-D-alanine ligase [EC:6.3.2.4]Escherichia coli K-12 3.30.470.20 149 10 73 3.56 4.84
Displaying entries 1 to 1 (page 1 of 1)


Domain ATOM Sequence

>pdb|2r85A02
YFGNKRVLRWESDRNLERKWLKKAGIRVGVPVYPHYFYSKVREELELMSIDRRYESNVDAIGRIPAKDQLEFDMDITYTV
IGNIPIVLRESLLMDVIEAGERVVKAAEELMGGLWGPFCLEGVFTPDLEFVVFEISARIVAGTNIFVNGSPYTWLRYDRP
VSTGRRIAMEIREAIENDMLEKVLT    

Domain COMBS Sequence

>pdb|2r85A02
YFGNKRVLRWESDRNLERKWLKKAGIRVGVPVYPHYFYSKVREELELMSIDRRYESNVDAIGRIPAKDQLEFDMDITYTV
IGNIPIVLRESLLMDVIEAGERVVKAAEELMGGLWGPFCLEGVFTPDLEFVVFEISARIVAGTNIFVNGSPYTWLRYDRP
VSTGRRIAMEIREAIENDMLEKVLT    

Domain History Events (12)

Domain assigned by auto on 24 Sep 2008 06:18

Assigning to "3.30.470.20" based on similarity with "2r84A02"

Flow stage update by auto on 24 Sep 2008 05:40

No in_process hits for Domain "2r85A02" ready to be processed

Update comment by auto on 24 Sep 2008 04:55

Domain "2r85A02" hits Domain "2r84A02" (100% over 100%) which is currently in process

Update comment by auto on 24 Sep 2008 04:08

Domain "2r85A02" hits Domain "2r7lA02" (52.4324324324324% over 99.4623655913979%) which is currently in process

Update comment by auto on 24 Sep 2008 03:24

Domain "2r85A02" hits Domain "2r7nA02" (52.4324324324324% over 99.4623655913979%) which is currently in process

Update comment by auto on 24 Sep 2008 02:37

Domain "2r85A02" hits Domain "2r7kA02" (52.4324324324324% over 99.4623655913979%) which is currently in process

Update comment by auto on 23 Sep 2008 23:19

Domain "2r85A02" hits Domain "2r7mA02" (52.4324324324324% over 99.4623655913979%) which is currently in process

Flow stage update by auto on 23 Sep 2008 23:17

Domain "2r85A02" hits Domain "2r7mA02" (52.4324324324324% over 99.4623655913979%) which is currently in process

Flow stage update by auto on 23 Sep 2008 23:17

NW result present for Domain "2r85A02"

Flow stage update by auto on 23 Sep 2008 08:17

All required files are present for Domain "2r85A02"

Flow stage update by auto on 22 Sep 2008 15:12

Beginning processing for Domain "2r85A02"

Insertion by auto on 22 Sep 2008 14:39

Final ChopClose added based on similarity with "2r84A"