CATH Domain: 2r4fA03 XML data for domain: 2r4fA03

Molscript image for 2r4fA03
2r4fA03
PDB coordinates for domain 2r4fA03

PDB 2r4f, Chain A, Domain 3

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.30 2-Layer Sandwich
3.30.70 Alpha-Beta Plaits
3.30.70.420 Gene3D
3.30.70.420.1
3.30.70.420.1.1
3.30.70.420.1.1.1
3.30.70.420.1.1.1.1
3.30.70.420.1.1.1.1.1

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Segment boundaries for domain 2r4fA03

Chopping figure for domain 2r4fA03
DomainStart PDB ResidueStop PDB Residue
2r4fA01 462 536
2r4fA02 537 585
2r4fA02 704 860
2r4fA03 587 703

Structural Neighbourhood (7 entries)

There are 7 matching structural neighberhood comparisons for CATH ID 3.30.70.420.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 7 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1r31A01 85.48 Pseudomonas mevalonii3-hydroxy-3-methylglutaryl-coenzyme A reductase 3.30.70.420 110 12 85 2.00 2.34
1tuvA00 76.10 Probable quinol monooxygenase ygiNProtein bindingEscherichia coli K-12 3.30.70.900 103 5 76 3.77 4.96
1in0A01 75.92 Hypothetical proteinHaemophilus influenzaeUPF0234 protein HI_1034 3.30.70.860 70 8 57 2.68 4.68
1q79A01 75.51 Poly(A) polymerase [EC:2.7.7.19]Bos taurusRNA degradationPoly(A) polymerase alpha 3.30.70.590 113 6 75 3.74 4.97
1nzaA00 75.29 Thermus thermophilus HB8Divalent-cation tolerance protein cutAPeriplasmic divalent cation tolerance protein 3.30.70.830 103 9 65 3.22 4.89
2j8sA03 74.99 Hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 familyAcriflavine resistance protein BProtein bindingEscherichia coli K-12 3.30.70.1320 100 11 72 3.38 4.65
1iujB00 74.58 TT1380 proteinThermus thermophilus 3.30.70.900 103 2 64 3.19 4.98
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Displaying entries 1 to 7 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2r4fA03
GMTRGPVVRLPRACDSAEVKAWLETSEGFAVIKEAFDSTSRFARLQKLHTSIAGRNLYIRFQSRSGDAMGMNMISKGTEK
ALSKLHEYFPEMQILAVSGNYCTDKKPAAINWIEGRG
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2r4fA03
GMTRGPVVRLPRACDSAEVKAWLETSEGFAVIKEAFDSTSRFARLQKLHTSIAGRNLYIRFQSRSGDAMGMNMISKGTEK
ALSKLHEYFPEMQILAVSGNYCTDKKPAAINWIEGRG
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 03 May 2008 14:20

Assigning to "3.30.70.420" based on similarity with "3bglC03"

Flow stage update by auto on 03 May 2008 14:07

No in_process hits for Domain "2r4fA03" ready to be processed

Flow stage update by auto on 03 May 2008 14:07

NW result present for Domain "2r4fA03"

Flow stage update by auto on 03 May 2008 08:28

All required files are present for Domain "2r4fA03"

Flow stage update by auto on 02 May 2008 08:40

Beginning processing for Domain "2r4fA03"

Insertion by auto on 02 May 2008 08:38

Final ChopClose added based on similarity with "2q1lC"