CATH Domain: 2qxfA01 XML data for domain: 2qxfA01

Molscript image for 2qxfA01
2qxfA01
PDB coordinates for domain 2qxfA01

PDB 2qxf, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.30 2-Layer Sandwich
3.30.420 Nucleotidyltransferase; domain 5
3.30.420.10 Gene3D
3.30.420.10.7
3.30.420.10.7.1
3.30.420.10.7.1.1
3.30.420.10.7.1.1.1
3.30.420.10.7.1.1.1.1

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Segment boundaries for domain 2qxfA01

Chopping figure for domain 2qxfA01
DomainStart PDB ResidueStop PDB Residue
2qxfA01 7 201
2qxfA02 214 313
2qxfA02 314 347
2qxfA03 361 420
2qxfA04 421 474

Structural Neighbourhood (5 entries)

There are 5 matching structural neighberhood comparisons for CATH ID 3.30.420.10.7.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 5 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2f96A00 81.80 Pseudomonas aeruginosaRibonuclease TRibonuclease T [EC:3.1.13.-] 3.30.420.10 196 17 86 3.52 4.06
2p1jA01 81.07 Thermotoga maritimaPyrimidine metabolismDNA replicationPurine metabolismMetabolic pathways 3.30.420.10 138 18 71 1.91 2.66
1w0hA00 80.57 Cytoplasm[EC:3.1.-.-]3'-5' exoribonuclease 1NucleolusHomo sapiens 3.30.420.10 194 9 88 3.66 4.13
1noyB02 78.08 DNA polymeraseEnterobacteria phage T4 3.30.420.10 226 14 67 2.78 4.11
2kfnA01 76.38 Pyrimidine metabolismDNA replicationNucleotide excision repairPurine metabolismMetabolic pathways 3.30.420.10 217 7 66 3.13 4.72
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Displaying entries 1 to 5 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2qxfA01
QQSTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGITPQEARAKGENEAAFAA
RIHSLFTVPKTCILGYNNVRFDDEVTRNIFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRL
EHLTKANGIEHSDAMADVYATIAMAKLVKTRQ
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2qxfA01
MMNDGKQQSTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGITPQEARAKGEN
EAAFAARIHSLFTVPKTCILGYNNVRFDDEVTRNIFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDG
LPSFRLEHLTKANGIEHSNAHDAMADVYATIAMAKLVKTRQ
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 26 Jan 2008 14:30

Assigning to "3.30.420.10" based on similarity with "1fxxA01"

Flow stage update by auto on 26 Jan 2008 14:09

No in_process hits for Domain "2qxfA01" ready to be processed

Flow stage update by auto on 26 Jan 2008 14:09

NW result present for Domain "2qxfA01"

Flow stage update by auto on 26 Jan 2008 11:08

All required files are present for Domain "2qxfA01"

Flow stage update by auto on 25 Jan 2008 08:32

Beginning processing for Domain "2qxfA01"

Insertion by auto on 25 Jan 2008 08:17

Final ChopClose added based on similarity with "1fxxA"